Gene Smal_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1896 
SymbolflgL 
ID6475921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2134586 
End bp2135788 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content64% 
IMG OID642731078 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_002028283 
Protein GI194365673 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.664262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.100262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC GCATCTCCAC CAGCATGATG TTCAACCAGT CCGTGTCGCT GATGATGGCC 
AAGCAGGCCA AGCTCAGCCA CCTGGAGCAG CAGATCGCCA CCGGCAGCAA GATCGTCAGC
GCCAAGGACG ATCCGGTCGG CGCCGGTGCT GCCGTTGGCC TGGACCGCAG CCTGGCCGCA
CTGGACCGGA TGAAGCTCAA TGCCGGCAAC GTGCAGAACC GTCTGGGCGT GCAGGAAAAC
ACCCTGGCGC AGGTCAACGA TCTGATGGGC CGGGTCAACG ACCTGACCAT CCAGGCCAGC
AACCCCGCCT TGAGCGCGGC CGACAAGAAG ACGCTGATCA CCGAATTGAA CCAGATCCGC
GACGGCCTGC TGTCGCTGGC CAACGCCGAC GACGGCACCG GCCGCTACGT GTTCGGCGGC
ACCAATGACG GCGACCCGCC ATTCGCCAAG ATCAATGGCA AGGTGGTCTA CCGTGGTGAC
CAGACCCAGC GCCAGGTCGA AGTCGGCCCG GATACCTATG TGCGTGATTC CCTGCCCGGC
AGCGAGATCT TCATGCGCAT CCCCACCGGC GACGGCTTCG TCGACGGCGG TGCCGCGGCG
GGCAATACCG GCAATGGCGT GCTGACCAAC ATCACCCGCG ACGGCAGCGA CAGCTGGAAC
GGCCAGAGTT TCAGCGTCCG CTTCACCGCA GCCAACCAGT ACGAAGTGCT CGATGGCGCC
GGCAACGTGA CCGGTACCGG CACCTACAAG GCCGGTGACA ATCTCGAAGT AAACGGGGTG
CGCCTGCAGA TCACCGGTGC CCCCGTTGCG GGCGACAGCT TCAATGTGAA GCCTGCGACC
AGCCGCGACA TCTTTGACAC CATGGACAAA CTGATCGCCG CGCTGGATGC CGATACCGGT
ACCACGGCGA AGATGAGCGC ACAGCAGAAC GAGCTGCAGA ATGCGCTGCG CGACGTGGCA
CGCGCGTCGG AACGGATGAT CGACTCACGT GCAGCCGGCG GCGCGCAGCT GAAGGCGCTG
GACAATGCCG CCGACATGCG TGAAGCCAAC GGCGTGACCC TGAAGACCAC GCTGTCGCAG
ATGCGCGACC TGGATTATGC CGATGCGCTG AGCCAGTACC AGTTGCAGAG CACGGCACTG
CAGGCTGCGC AGACGATCTT CTCGCAGATG CAGTCGATGT CGTTGTTCAA CAAGATCCGC
TGA
 
Protein sequence
MSSRISTSMM FNQSVSLMMA KQAKLSHLEQ QIATGSKIVS AKDDPVGAGA AVGLDRSLAA 
LDRMKLNAGN VQNRLGVQEN TLAQVNDLMG RVNDLTIQAS NPALSAADKK TLITELNQIR
DGLLSLANAD DGTGRYVFGG TNDGDPPFAK INGKVVYRGD QTQRQVEVGP DTYVRDSLPG
SEIFMRIPTG DGFVDGGAAA GNTGNGVLTN ITRDGSDSWN GQSFSVRFTA ANQYEVLDGA
GNVTGTGTYK AGDNLEVNGV RLQITGAPVA GDSFNVKPAT SRDIFDTMDK LIAALDADTG
TTAKMSAQQN ELQNALRDVA RASERMIDSR AAGGAQLKAL DNAADMREAN GVTLKTTLSQ
MRDLDYADAL SQYQLQSTAL QAAQTIFSQM QSMSLFNKIR