Gene Smal_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1886 
Symbol 
ID6475911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2124335 
End bp2125279 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content61% 
IMG OID642731068 
ProductIntegrase catalytic region 
Protein accessionYP_002028273 
Protein GI194365663 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.280908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATC ATAAAAATGC CCGTTTGACG CCGTTTAGTC GAGCGCTTCT GGTCCGCCGC 
ATCCTCCACG AGGGCCTACG CCCGGAAGAA GCAGCTCAAG CGTGTGGCGT AAGTGTGCGT
ACGGCCTACA AGTGGCTGGC CCGATTCCGC CAGTTCGGGG CACCGGGCCT GGAAAACCGC
AGCTCACGGC CTCACCAGAC GCCGCATGCC ACACCTGCTC CGGTAGTCGA GCAAATCAAG
GAGCACCGCC GTAAGCGGCA GACCTACCTG ACCATCTCCA AGGCGCTGGG GGTCGGCCAC
AGTACGATTT CAAGGCTGAT GCGCGCCCAC GGCCTCAATC GGTTGTGTCG GCTTGATCCG
CCCAAGGAGG TCATCCGATA CGAATACGAT CAGCCCGGAG GGCTGCTGCA TCTGGACATC
AAGAAGCTGG GCAACTTCCA GCGGCCAGGG CACAGAACCG ATGCCAAGCG CAGGGGAAAC
GCCGCCGGCG GTGGCTGGGG CTACGTCCAC GTGGCCATCG ACGATCACTC CCGGGTCGCC
TTCAGCAGCG TCCACCCCAA CGAACAGGGC GAAACCGCCT GTCAGGCGTT GCTGGGCGCT
CTGGAGTACT ACGCCAGCCT GGGAATCACC TTCAAGCGGA TCCTGACCGA CAACGGTGCC
TGCTATCGCT CTACCGCCTT TGCCAAGCTG CTCAAATCCC TTGGGATCAA GCACATCAGA
ACCAAGCCCT ACACGCCGCG GACCAATGGC AAAGCCGAGC GCTTCATCCA GACCAGCCTG
CGCGAGTGGG CTTACGCCTG CGAGTACGCA TCCTCGGACC AGCGCAATTC CGTGTTGAAC
CAATGGCTGC ACCACTACAA CTGGCACCGT CCCCATATGG CGATCGGCGG CCAGCCACCT
ATCTCAAGAG TACGGCTGAA CAACGTAGTG GGTTTACACA GTTAG
 
Protein sequence
MNNHKNARLT PFSRALLVRR ILHEGLRPEE AAQACGVSVR TAYKWLARFR QFGAPGLENR 
SSRPHQTPHA TPAPVVEQIK EHRRKRQTYL TISKALGVGH STISRLMRAH GLNRLCRLDP
PKEVIRYEYD QPGGLLHLDI KKLGNFQRPG HRTDAKRRGN AAGGGWGYVH VAIDDHSRVA
FSSVHPNEQG ETACQALLGA LEYYASLGIT FKRILTDNGA CYRSTAFAKL LKSLGIKHIR
TKPYTPRTNG KAERFIQTSL REWAYACEYA SSDQRNSVLN QWLHHYNWHR PHMAIGGQPP
ISRVRLNNVV GLHS