| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1883 |
|---|
| Symbol | |
|---|
| ID | 6475908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2120618 |
|---|
| End bp | 2122123 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642731065 |
|---|
| Product | sigma54 specific transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002028270 |
|---|
| Protein GI | 194365660 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.725462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAT CGCGCATCCT GGTGCTGGAC AACGACGCCG TGCGCGCAGA GCGCACCGTT
GCCCTGCTCG AATTCATGGA CTTCAACCCG CGTTGGGTCT CCGACGCGGC CGACTTCGAC
CTGGGCCGCC AGCGCCAGAA CGACTGGATG GCAGTGATCG TCGGCAGCCT CGACGACAGC
GCCGCCAGCG CCGCGCTGTA CAACTGGCTC GGCGGCAGCA GCCTGCCACC GCCGGTGCTG
CTGGCCGATG GCGAAGCCAC CGCATTCGCG CAGCAGCACG GCCTGCATGA AGCCAACATC
TGGCCGCTGG AAACCCCGCT GCGGCATACG CAGATGGAAG CGCTGCTGCG TCGCGCCAGC
CTCAAGCGCC TGGATGCCGA GCACCAGGCC GGTGCCGTGC AGGAACAGGG CCCGACCGGT
CATGGCCCGG CGGTAACCGA ACTGCGCACC ATGATCGAAC AGGTAGCCGC CTTCGACACC
ACCGTGCTGG TGCTGGGCGA ATCGGGTACC GGCAAGGAAG TTGTATCTCG CTCGATCCAC
CAGCGCTCGC CGCGCCGTGA TGGCCCGTTC GTGGCGATCA ACTGCGGCGC CATTCCGCCG
GACCTGCTGG AAAGCGAGCT GTTCGGTCAC GAAAAGGGTG CCTTCACCGG TGCACTGACC
GCGCGCAAGG GCCGTTTCGA AATGGCCGAG GGCGGCACCC TGCTGCTCGA CGAAATCGGC
GACATGAGCC TGCCGATGCA GGTGAAGCTG CTGCGCGTGC TCCAGGAGCG CAGCTTCGAA
CGCGTGGGTG GCAACCAGAC CATCCGCTGC AACGTGCGCG TCGTTGCCGC GACCCACCGC
GACCTGGAAA CCCGTATCGC CGAAGGCAAG TTCCGCGAGG ATCTGTTCTA CCGCCTCAAC
GTGTTCCCGA TCGACGTGCC GGCCCTGCGC GAACGCCGCG AAGACCTGCC GGTGCTGGTG
GAGACCATCG CCGCGCAGCT GGCCCGCACC GGCCGTGGCG AAGTGCGCTT TACCGCCGAA
GCGCTGCAGG CACTGGCCGG CTACGAGTGG CCGGGCAACG TGCGTGAGCT GACCAATCTG
GTCGAGCGCC TCGCCGTGCT GCATCCGGGT GGCTCCGTGC GCGTGCAGGA TCTGCCGGCG
CGCTACCGTG GCGATGCCGT CCTGGCAGCA GTGGCCGCAC CGGCACCGGC GCAGCCGGTC
GCCAGCGAAG AACGCCTGGA CCTGCGCAGC TTCTCGTTCC ACACCCCGGG CAGCGGCAAC
CAGCCTGCAC TGGAACACGG CATCGCCGTC AATCGCCCAG CGGCACCGGT CGCACTGCCT
GACGAAGGCA TGGACCTGCG CAACCACATG GCCAACATCG AACTGGGCCT GATCAACGAG
GCACTGGAGC GCACCCAGGG CGTGGTCGCC CACGCCGCCC AGCTGCTCGG CCTGCGCCGC
ACCACCCTGG TGGAAAAACT GCGCAAGTAC GGCGTTGAAC GCGAGCAGGC CGAACTGGCC
AGCTGA
|
|---|
| Protein sequence | MSESRILVLD NDAVRAERTV ALLEFMDFNP RWVSDAADFD LGRQRQNDWM AVIVGSLDDS
AASAALYNWL GGSSLPPPVL LADGEATAFA QQHGLHEANI WPLETPLRHT QMEALLRRAS
LKRLDAEHQA GAVQEQGPTG HGPAVTELRT MIEQVAAFDT TVLVLGESGT GKEVVSRSIH
QRSPRRDGPF VAINCGAIPP DLLESELFGH EKGAFTGALT ARKGRFEMAE GGTLLLDEIG
DMSLPMQVKL LRVLQERSFE RVGGNQTIRC NVRVVAATHR DLETRIAEGK FREDLFYRLN
VFPIDVPALR ERREDLPVLV ETIAAQLART GRGEVRFTAE ALQALAGYEW PGNVRELTNL
VERLAVLHPG GSVRVQDLPA RYRGDAVLAA VAAPAPAQPV ASEERLDLRS FSFHTPGSGN
QPALEHGIAV NRPAAPVALP DEGMDLRNHM ANIELGLINE ALERTQGVVA HAAQLLGLRR
TTLVEKLRKY GVEREQAELA S
|
|---|
| |