Gene Smal_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1881 
Symbol 
ID6475906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2119200 
End bp2119565 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content66% 
IMG OID642731063 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_002028268 
Protein GI194365658 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.664411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACT CCGTCACGTC GATCCTTTCG CAGATCCGCT CCTATCAGAC CCAGATGGGA 
CAACCGGCGC TCAACCCGCT GGGCGAAACG CCGCGCAGCA ACGCCCTGCC GGGCACGGTG
CTGGATGCAC CGCAGGCCCA GCCGGCCAGC TTCACCGAAA CCCTGCGTGG TGCGATTGCC
GGCGTCAACG ACGCGCAACA GAAGTCCGGC GCCCTGGCCA AAGCCTTCGA AATGGGCGAC
CCCAGCGCCG ACCTCGCCAA GGTCATGGTC GCCTCGCAGC AGTCCCAGAT CGCCTTCCGC
GCCACCGTGG AAGTCCGCAA CCGTCTCGTC CAGGCCTACC AGGACGTGAT GAACATGCCG
CTGTAA
 
Protein sequence
MSHSVTSILS QIRSYQTQMG QPALNPLGET PRSNALPGTV LDAPQAQPAS FTETLRGAIA 
GVNDAQQKSG ALAKAFEMGD PSADLAKVMV ASQQSQIAFR ATVEVRNRLV QAYQDVMNMP
L