Gene Smal_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1872 
Symbol 
ID6475897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2110852 
End bp2111187 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content66% 
IMG OID642731054 
Productflagellar motor switch protein FliN 
Protein accessionYP_002028259 
Protein GI194365649 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.267191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.473896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA TCGACGCCCT CGAACCGACC CCGGCCCAGT TCGGCACCCT GCAGGCCGAA 
GAAGGGGCCG GCGCCGACCT CAATCTGGAC GTGATCCTCG ACGTGCCGGT GACCCTGTCG
CTGGAAGTCG GTCGCGCCCG CCTGCCGATC CGCAACCTGC TGCAGCTCAA CCAGGGCTCG
GTGGTGGAAC TGGAACGCGG CGCCGGCGAA TCGCTGGATG TGTTCGTCAA CGGCACTTTG
ATCGCCCACG GCGAGGTGGT GGTGATCAAC GACCGCTTCG GCGTTCGCCT GACCGACGTG
GTCAGCCCGA GCGAGCGGAT CAGGAGACTG CGTTGA
 
Protein sequence
MNDIDALEPT PAQFGTLQAE EGAGADLNLD VILDVPVTLS LEVGRARLPI RNLLQLNQGS 
VVELERGAGE SLDVFVNGTL IAHGEVVVIN DRFGVRLTDV VSPSERIRRL R