| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1867 |
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| Symbol | |
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| ID | 6475892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2106201 |
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| End bp | 2108333 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642731049 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002028254 |
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| Protein GI | 194365644 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.559225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.957058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTAG GCACGTACAA CCCGTGGCTG GTGGCGATCT CGCTGCTGGT TGCCGTGATG
GCTTCGTACA CCGCGCTGGC GATGGCCGGG CGCACGGTCA CTGCACCCGG CAAGGGCGCG
GCGTGGTGGT GGCGCCTCGG TGGTGGCTTC GCCATGGGCC TGGGCATCTG GTCGATGCAC
TTCATCGGCA TGCTCGCCTT CGACCTGCCC ATTCCGCTCG GCTACGACCT GCCCATCACC
CTGCTTTCCC TCGCATTGGC GATCGCCTCA TCGGTGTTCG CGCTATGGCT GGTTTCGCTG
CGTACCCTGC CCCACCCGCG GTTGGCCGGT GGCGCGCTGC TGATGGGCAC CGGCATTGCC
GGCATGCATT ACGTTGGCAT GGCCGCAATG CGCATGCAGC CGGGCATCGA CTACGACCCG
GGCTGGCTGC TGTTCTCGCT GATGGTGGCT GTGGCCGCCT CGTGGACGGC GCTGTACGTG
GCGTTCCGCC TGCGCGCGCA GCGCACCCGT GTCGGCGACC GGCTCGCGGC TGCCGGCCTG
CTCGGGCTGG CCATCGTCGG CATGCACTAC ACCGGCATGG CCGCCGCGCG CTTTCCGGAA
GGCAGCATCT GCGGCGCAGC CGTCGGCGAT GGGCTGCAGA GCGAATGGCT GGCCATGCTG
GTGGTGGTGC TGACCGTCGC CATCCTGGCC GTGGTGCTGG TGGTCTCCTG GCTGGACCAG
CGGGTGGAAG CGCAGCTGCT GCGCCTGCGC AATTCCCTGT TGAGTACCTC ACTGACCGAC
GCACAGCAGG AACTGACCCA GGCCGCACTG CACGACCCGC TTACCCGCCT GCCCAACCGC
CTGCTGCTGC AGCGTCGGAT CGTGCAGGCG CTGGCCGAGG CCGAACAGGG CGGCAGCCGC
TTCGCGGTGA TGTTCATGGA CCTGGATGGC TTCAAGCAGG TCAACGATGC CTACGGCCAC
CAGGCCGGCG ATGCACTGTT GGTTGCGGTG GCCGAACGCA CGCGCCAGCT GCTTCGGCCC
AACGACATGC TGGCCCGTCT GGGCGGTGAC GAATTCGTGC TGGTGGTGCG CATCGAGCAC
GACGAGGACC TGCCGACTCT GGCCCGGCGC ATCCTGCAGG CGGTCGGCAG CGGGCCGTTG
CTGGCCGACA ACGAACTGCA GGTGACCGCC AGCATCGGCG TGGCGATCTG TCCGGATCAC
GCTGCCAGCG AGCGGCAGCT GATGGCCTTT GCCGATGCAG CGATGTACCA GGCCAAGGAA
TCCGGACGCA ACGCTTTCGT GCTGTTCGCC GACTGGATGA ATGACAGCGC CGAACAACAG
TTCCGATTGC TTGCCGACCT GCGCCGGGCC ATCGGCAGCG AGCAGCTGTT CCTCAACTAC
CAACCCAAGA TCCGCGTGGC CACGCAGAAG GTGGCCGGCG CCGAGGCACT GATCCGTTGG
CGGCACCCAG AACATGGCCT GATCCCGCCG GATCGGTTCA TCCGCCTGGC CGAGCGCAGC
GGCGCGATCA ACGACATCGG CCGCTGGGCG CTGGACCAAG CCTGCCTGCA GTTGCGTCGC
TGGCACGATG CCGGTCACGA AGGCTGGTCG ATGTCGGTGA ACCTGTCGCC GGTGCAGTTC
AGCTCACCGC ACCTGCTGCA GGATGTGCGT GAAGTGATCG AACGCTACAA CATTGCCCCG
CGCCACCTTG TGCTGGAGAT CACCGAAAGC ACGGTGATGC GCGATACCGA TACCAGCCTG
CGCCTGCTGC AGGCGCTTTC GGCACTGGGC GTGGGCATCT CCATCGATGA CTTCGGCACC
GGCTACTCCA GCCTGCTGTA CCTGAAGCGG CTGCCGGCCA CCGAAATCAA GATCGACCAC
GCCTTCGTGC GCGACCTGGA GCACAGCGCC GAGGACGTGG TGATCGTCTC GGCAATCGTG
GCGCTGGGCC ACGCGCTGGA CATGGACATC GTCGCCGAAG GCGTGGAAAC CGCCGCCCAG
CGCGCCTACC TGGAGCGGCT GGGCTGCGAC TACCTGCAGG GCTATCTGCT CGGTCGCCCG
GTCGATGCCG CCCGCTTCAT GCAGCTGCAC GACCTGCCCC GGCCTCGGGT GGAGCTGGCG
CAGAGCCCGC CGACGCAGCA CCCGCCGGGG TAA
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| Protein sequence | MLVGTYNPWL VAISLLVAVM ASYTALAMAG RTVTAPGKGA AWWWRLGGGF AMGLGIWSMH
FIGMLAFDLP IPLGYDLPIT LLSLALAIAS SVFALWLVSL RTLPHPRLAG GALLMGTGIA
GMHYVGMAAM RMQPGIDYDP GWLLFSLMVA VAASWTALYV AFRLRAQRTR VGDRLAAAGL
LGLAIVGMHY TGMAAARFPE GSICGAAVGD GLQSEWLAML VVVLTVAILA VVLVVSWLDQ
RVEAQLLRLR NSLLSTSLTD AQQELTQAAL HDPLTRLPNR LLLQRRIVQA LAEAEQGGSR
FAVMFMDLDG FKQVNDAYGH QAGDALLVAV AERTRQLLRP NDMLARLGGD EFVLVVRIEH
DEDLPTLARR ILQAVGSGPL LADNELQVTA SIGVAICPDH AASERQLMAF ADAAMYQAKE
SGRNAFVLFA DWMNDSAEQQ FRLLADLRRA IGSEQLFLNY QPKIRVATQK VAGAEALIRW
RHPEHGLIPP DRFIRLAERS GAINDIGRWA LDQACLQLRR WHDAGHEGWS MSVNLSPVQF
SSPHLLQDVR EVIERYNIAP RHLVLEITES TVMRDTDTSL RLLQALSALG VGISIDDFGT
GYSSLLYLKR LPATEIKIDH AFVRDLEHSA EDVVIVSAIV ALGHALDMDI VAEGVETAAQ
RAYLERLGCD YLQGYLLGRP VDAARFMQLH DLPRPRVELA QSPPTQHPPG
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