Gene Smal_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1864 
Symbol 
ID6475889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2101073 
End bp2102701 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content71% 
IMG OID642731046 
Productflagellar biosynthesis regulator FlhF 
Protein accessionYP_002028251 
Protein GI194365641 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.625266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA AACGATTCGT CGCCGCCGAC ATGCGCTCGG CCATGAACCT GGTGCGCAAG 
GAACATGGTC CTGACGCCGT GATCCTGTCC AACCGCCGGA TCGAGGAAGG CATCGAGATC
GTCGCCGCCG CCAACTACGA CGAGAGCGCC GTGCAGCGTG CACTGGAAGC CTCGCGTCGT
GACATCGCCC CGCCGCCGGC ACCGAAGCCG CGCAACGCTG CCGATGCGGT GATCGCTGCT
GTGACCCGTC GCCGCAGTGC CACCCCGGCA CCAGAGCCGG TGGCTGCGAC CACCTCGGCC
GTTGCCGCGC TGGCCCGCGC TGCCGTCGGT GCCACCGGCC GCACCCTGGA CAGCGCCGAC
GAGATCGTGC CGACCCGCGG CAGCACCGGC TTCGCCGCAA CCCTGGCCCG CGCTGCCGTC
AACGAACCGG CGCGTGCGGA ACAGGCCTTC GGCCCGTTCG CGGATGCCGT CGCCGACGCT
GCCGCCACAC CCGCCGCGAT CGCGACGGCC AACCGTGCCC GCTTCCAGAT CGATCCGCCG
CATGCCGAGC ACCAGCAAGG CCCGGCCCCG GCCGTGCAGC CGCCGCCGCT GCCGACCAGC
GTTGTGGCCG ACGCGCAGTC GCAGACCTTC GCCGACGAAC CGTCGCTGGC GGACGCAACC
GTCGACGCCG CCCCGGAACC GACCCTTGCA CCGGCCCCGG TGCTGACCGT GGTCGCCCAG
GACGATGCCG AGATCCGACA GCTGCGCCAG GAAGTGGCCG GCATGCGCCA GGTGATCGAG
CGCGAGATGA ACCGCTTCAC CGACGAGCGC CTGCGTGGCT GCCCGGTGCG CGCCACTGCA
CTGGACCTGA TGGACGAGTA CGGCTTCGAC GCCGGCCTGG CCCGCGACGT GGCCATGCAG
ATCCCGCTGG AGACCGATGC CCACCGCGGC CGCGGCCTGA TGCTGGGGCT GATCTCGCGC
AAGCTACCGA TCGCCCCGGT CGACCCGCTG GAGGAAGGCG GCGTGATCGC CCTGGTCGGC
CCGACCGGCG CCGGCAAGAC CACCACCATC GCCAAGCTGG CCTCGCGCTT CGCCGAGAAG
CACGCACCGC GCGATGTCGC CCTGGTCACC ACCGACACCA CCCGCATCGG TGCGCGTGAG
CAGCTGTACG GTTACGGCCG CCAGCTCGGC ATCGCGGTGC ACGAGGCCAA CAGCGGCACC
GACCTGGACC AGCTGCTGGA ACGCTTGAAG GACTACAAGC TGGTGCTGAT CGACACCGCC
GGCCTGGGCC CGCGCGACCG CGCACTGGCC GCCCAGCTGC AGTGGCTGCG TGCCGCCCGC
CAGGTCCGCA CCCTGCTGGT GCTGCCGGCC AACACCAGCT TCGGCGACAT GGACGAGGTG
GTCCGCCGCT TCGGCGCGGC CAACCTGCAG GGCCTGGTGC TGAGCAAGCT GGACGAGACC
GGCCGCTTCG GCAACGCCCT GTCGGTAGCC GTGGACCACG CCCTGCCGAT CACCTGGGTG
ACCGACGGCC AGGACGTTCC GGAGGACCTG CACCGGGCCA GTGCAGCCAA TCTCGTACTT
CGCCTTGAAG ATTTGCGCCG CGCGGCCGAT ATGCCCTGCA ACCCGGAGTT GAACCATGCC
GTCGCGTGA
 
Protein sequence
MKIKRFVAAD MRSAMNLVRK EHGPDAVILS NRRIEEGIEI VAAANYDESA VQRALEASRR 
DIAPPPAPKP RNAADAVIAA VTRRRSATPA PEPVAATTSA VAALARAAVG ATGRTLDSAD
EIVPTRGSTG FAATLARAAV NEPARAEQAF GPFADAVADA AATPAAIATA NRARFQIDPP
HAEHQQGPAP AVQPPPLPTS VVADAQSQTF ADEPSLADAT VDAAPEPTLA PAPVLTVVAQ
DDAEIRQLRQ EVAGMRQVIE REMNRFTDER LRGCPVRATA LDLMDEYGFD AGLARDVAMQ
IPLETDAHRG RGLMLGLISR KLPIAPVDPL EEGGVIALVG PTGAGKTTTI AKLASRFAEK
HAPRDVALVT TDTTRIGARE QLYGYGRQLG IAVHEANSGT DLDQLLERLK DYKLVLIDTA
GLGPRDRALA AQLQWLRAAR QVRTLLVLPA NTSFGDMDEV VRRFGAANLQ GLVLSKLDET
GRFGNALSVA VDHALPITWV TDGQDVPEDL HRASAANLVL RLEDLRRAAD MPCNPELNHA
VA