Gene Smal_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1852 
Symbol 
ID6475877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2089582 
End bp2091576 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content68% 
IMG OID642731034 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002028239 
Protein GI194365629 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.758409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.445859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGG ACCTGCAACG CTTCCACGCC ACCTTCTTCG AGGAGAGCCG CGAAGGCCTC 
GACGCGATGG AGGCTGGCCT GCTGGCCCTG GAATCGGGGC AGCAGGACGC GGAGATCATC
AATTCGGTGT TCCGCGCCGC CCACTCGATC AAGGGCGGCG CCGGCACCTT CGGCTTCGAT
GCGATTGCCG GCCTGACCCA CGTGCTGGAA ACGCTGCTCG ATGAGCTGCG TGCAGGCAAG
CGGGCACTGG AAGGCCACGC TGTCGACGCC ATGCTGTCTT CGGTGGATGT GCTGCGCGCC
CTGCTGCGCG AAGCCGAGCA CGGCCAGGCC GCCGATCCGG CCGCCGTCGT CGCGGTGAAG
GCGCGCCTGG AAGCCGTACT GTCCGGCCAG GCGGCATCAA GCGCACCGGC CGCCCCGGTT
GCCAAGGTGG ACGACACGCC GGAAGCCTGG CAGATCGGCT TCACCCCGGC GCCGTCGCTG
TTCATGAGCG GCAACGATCC ACTGCGCATC ATCCGCGAAC TGGAACACCT CGGTTCGCTG
CAGGTGGCTG CGCGCATGGA ACGCCTGCCC GGCTTCGCCC AGCTCGACCC GCTCGAGGCC
CACCTGGCGT GGGACCTGGG ACTGGTCGGC AAGGTGCCGC GCAGCAAGAT TGAAGACACC
TTCGCCTGGG TACTGGACGA CTGCGAGCTG GACATCCGTC CGGCCGCACC GCCGAGCCTG
GCCACGCAGG CCCCGGCTGC GTCCGCTGCT GCCCTTTCCA CACCTGTTGC TGCACCGGCT
GCGGCCGCCG CTCCTGCCGC CAGCGGTGGT GGCAGCCAGG AGGCGGAGAC CTCGATCCGC
GTCAGCGTCG ACAAGGTCGA TGCACTGATC AACCTGGTCG GCGAACTGGT CATCACCCAG
GCCATGCTCA AGCAGGTCTC GCACGCGCTG GACCCGGTCC ACGCCGAGAG CCTGTTTGCC
GGCCTGGACC AGCTTGAACG CAATACACGC GACCTGCAGG AAGCGGTGAT CGGTGTGCGC
ATGCTGCCGG TCGATGCAGT GTTCCGCCGC TTCCCGCGCC TGGTCCGCGA CCTCTCCGGC
CGTCTCGGCA AGCAGGTCCG TCTGCGCACC GTCGGCGAAG GCACCGAGCT GGACAAGGGC
CTGATCGAGA AGATTGCCGA TCCGCTGGTC CACCTGGTGC GCAACTCGAT CGACCACGGC
CTGGAAATGC CGGACGTGCG ACGTGGTGCG GGCAAGGATG AAACCGGCAC GATCACCCTG
GCGGCATCGC ACCAGGGCGG CCACATCGTC ATCGAAGTCA GCGACGACGG CCGCGGCCTG
GACCGTGCCA AGATCCTCGC CAAGGCCAGC GAGCGCGGTC TGGCCGTACC GGACAACCCG
ACCGATTCGC AGGTCTGGGA CCTGATCTTC CAGCCCGGCT TCTCCACTGC AGACGCGGTC
ACCGACCTGT CCGGCCGCGG CGTCGGCATG GACGTGGTCC GCCGCAACAT CCAGGCACTG
GGTGGCGAAG TGCAGATCGA AAGCGGCCTC GGCACCGGCA CGCGCACGCT GATCCGCCTG
CCGCTGACCC TGGCCATCCT CGATGGCATG ACCGTGGCGG TGGCCGGCGA AACCCTGATC
CTGCCGCTGG CCTACGTGCT GGAGGCACTG CAGCCGCAGC CCGAGGACAT CCGCAGCATG
GCCGGCGAAG GCCGCGTGCT GCGCGTGCGT GGCGAATACC TGCCGATCCT GTCGCTGAGC
GAGTACTACG GCTACGGTAA CCGCGCCCCC GGCAGCGAAT CGCTGGTGGT GGTGGTCGAA
GGCGATGGCC AGAAGATCGC ACTGGAAGTC GACGAGCTGG TCGGCCAGCA GCAGGTGGTG
GTGAAGAACA TTGAGAACAA CTACCGCCGC ATCGGCGGGG TGTCCGGTGC CACCATCCTC
GGCGATGGCC GCGTGGCGCT GATCGTCGAC ATCGGTGGCC TGGTGCGCTC GCTGCGGATG
CCGCAGGCCG CCTGA
 
Protein sequence
MSMDLQRFHA TFFEESREGL DAMEAGLLAL ESGQQDAEII NSVFRAAHSI KGGAGTFGFD 
AIAGLTHVLE TLLDELRAGK RALEGHAVDA MLSSVDVLRA LLREAEHGQA ADPAAVVAVK
ARLEAVLSGQ AASSAPAAPV AKVDDTPEAW QIGFTPAPSL FMSGNDPLRI IRELEHLGSL
QVAARMERLP GFAQLDPLEA HLAWDLGLVG KVPRSKIEDT FAWVLDDCEL DIRPAAPPSL
ATQAPAASAA ALSTPVAAPA AAAAPAASGG GSQEAETSIR VSVDKVDALI NLVGELVITQ
AMLKQVSHAL DPVHAESLFA GLDQLERNTR DLQEAVIGVR MLPVDAVFRR FPRLVRDLSG
RLGKQVRLRT VGEGTELDKG LIEKIADPLV HLVRNSIDHG LEMPDVRRGA GKDETGTITL
AASHQGGHIV IEVSDDGRGL DRAKILAKAS ERGLAVPDNP TDSQVWDLIF QPGFSTADAV
TDLSGRGVGM DVVRRNIQAL GGEVQIESGL GTGTRTLIRL PLTLAILDGM TVAVAGETLI
LPLAYVLEAL QPQPEDIRSM AGEGRVLRVR GEYLPILSLS EYYGYGNRAP GSESLVVVVE
GDGQKIALEV DELVGQQQVV VKNIENNYRR IGGVSGATIL GDGRVALIVD IGGLVRSLRM
PQAA