Gene Smal_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1850 
Symbol 
ID6475875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2086026 
End bp2086799 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID642731032 
ProductYcgR family protein 
Protein accessionYP_002028237 
Protein GI194365627 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.184522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG GCAACGACAC TGCAGTGCAC GATGTCCACG CGGCCGACGC CGCTGACGAA 
CGCTTCCTGG TCCGCAACCC GCGCCAGCTG CGGCAGCTGC TGCGTTCGCT GATCGACCAG
CGTTCGCTGA TCAACGCACA TATCGACGGC CGCGACCGTT CGTTCCCGAC TGCGCTGCTT
GAGCTCGACG AGGACGAAGA CTACCTCCTG CTCGATGGCA GCCCCCAGGA AGCGTCCAAC
CGCGCCGCCG AGCAGGCCGA CCATCTGCTG TGCTTCGCCC AGCTTGAACG CGTGCTGGTG
CGCTTCCGGC TGCAGGAACT GCAGCGCGTG GACAACGATG GTCACGTCGC CTTCCGCGCC
CCGCTGCCAG ACGAGCTGGT GCACCTGCAG CGGCGTGAAC TGTACCGGCT GGAGACCCCG
GTCACCGACT CGCCGCAGCT GCAGCTGCCG GCCGCCGAAG ACCGTAGCGA GGCACTGTCG
ATGCGGGTGG TTGATATCAG TGGCGGCGGC CTGGCCGTGG TGGTGCCCAC CGACTGCGCG
GTGTTCAGCC TGCAGAAGCG CTACCCGGCC GTGCTGTCGC TGCCCGACGG CCCGGACCTG
GAGATCGAGC TGGTTGTCTG CAACCTGCTG CCACAGCGCC AACCCAATGG CATCGAGATC
AAGCGCGTGG GCATGCGCTT CGACATCCTG CCGCGTGGCG GCGACAGTGC CATCCAGCGC
TACATCTTCC GCATCGACCG CCAGCGCAAG GCGCGTCGCA ACGGCGAGCT GTAG
 
Protein sequence
MSDGNDTAVH DVHAADAADE RFLVRNPRQL RQLLRSLIDQ RSLINAHIDG RDRSFPTALL 
ELDEDEDYLL LDGSPQEASN RAAEQADHLL CFAQLERVLV RFRLQELQRV DNDGHVAFRA
PLPDELVHLQ RRELYRLETP VTDSPQLQLP AAEDRSEALS MRVVDISGGG LAVVVPTDCA
VFSLQKRYPA VLSLPDGPDL EIELVVCNLL PQRQPNGIEI KRVGMRFDIL PRGGDSAIQR
YIFRIDRQRK ARRNGEL