Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1850 |
Symbol | |
ID | 6475875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2086026 |
End bp | 2086799 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642731032 |
Product | YcgR family protein |
Protein accession | YP_002028237 |
Protein GI | 194365627 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.184522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACG GCAACGACAC TGCAGTGCAC GATGTCCACG CGGCCGACGC CGCTGACGAA CGCTTCCTGG TCCGCAACCC GCGCCAGCTG CGGCAGCTGC TGCGTTCGCT GATCGACCAG CGTTCGCTGA TCAACGCACA TATCGACGGC CGCGACCGTT CGTTCCCGAC TGCGCTGCTT GAGCTCGACG AGGACGAAGA CTACCTCCTG CTCGATGGCA GCCCCCAGGA AGCGTCCAAC CGCGCCGCCG AGCAGGCCGA CCATCTGCTG TGCTTCGCCC AGCTTGAACG CGTGCTGGTG CGCTTCCGGC TGCAGGAACT GCAGCGCGTG GACAACGATG GTCACGTCGC CTTCCGCGCC CCGCTGCCAG ACGAGCTGGT GCACCTGCAG CGGCGTGAAC TGTACCGGCT GGAGACCCCG GTCACCGACT CGCCGCAGCT GCAGCTGCCG GCCGCCGAAG ACCGTAGCGA GGCACTGTCG ATGCGGGTGG TTGATATCAG TGGCGGCGGC CTGGCCGTGG TGGTGCCCAC CGACTGCGCG GTGTTCAGCC TGCAGAAGCG CTACCCGGCC GTGCTGTCGC TGCCCGACGG CCCGGACCTG GAGATCGAGC TGGTTGTCTG CAACCTGCTG CCACAGCGCC AACCCAATGG CATCGAGATC AAGCGCGTGG GCATGCGCTT CGACATCCTG CCGCGTGGCG GCGACAGTGC CATCCAGCGC TACATCTTCC GCATCGACCG CCAGCGCAAG GCGCGTCGCA ACGGCGAGCT GTAG
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Protein sequence | MSDGNDTAVH DVHAADAADE RFLVRNPRQL RQLLRSLIDQ RSLINAHIDG RDRSFPTALL ELDEDEDYLL LDGSPQEASN RAAEQADHLL CFAQLERVLV RFRLQELQRV DNDGHVAFRA PLPDELVHLQ RRELYRLETP VTDSPQLQLP AAEDRSEALS MRVVDISGGG LAVVVPTDCA VFSLQKRYPA VLSLPDGPDL EIELVVCNLL PQRQPNGIEI KRVGMRFDIL PRGGDSAIQR YIFRIDRQRK ARRNGEL
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