| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1832 |
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| Symbol | |
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| ID | 6475785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2062514 |
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| End bp | 2064196 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642731014 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_002028219 |
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| Protein GI | 194365609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.287087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.448798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC ATAACGAGTA CGACTACATC ATCATCGGCG CCGGTTCGGC CGGCAACGTG
CTGGCCACCC GCCTCACCGA AGATGCCGAT GTCAGCGTGC TGCTGCTGGA AGCCGGTGGC
CCGGACTACC GGCTCGACTT CCGTACCCAG ATGCCGGCGG CACTGGCCTT CCCGCTGCAG
GGCAAGCGCT ACAACTGGGC GTACAAGACC GATCCCGAGC CCTTCATGAA CAACCGCCGC
ATGGACTGCG GCCGTGGCAA GGGGCTGGGT GGCTCGTCGC TGATCAACGG CATGTGCTAC
ATCCGCGGCA ACGCGATGGA CTACGACAAC TGGGCCAGCA TGCCGGGCCT GGAAGACTGG
ACCTACCTGG ACTGCCTGCC GTACTTCCGC AAGGCCGAAA CCCGTGACAT CGGCCCCAAC
GACTACCACG GTGGCGAAGG CCCGCTGCGC GTGACCACGC CCAAGGCCGG CAACAACGAG
CTGTTCGCTG CGATGGTCGA GGCCGGCGTG CAGGCCGGCT ACCCGCGCAC CGACGACCTC
AACGGCTACC AGCAGGAAGG CTTCGGCCCG ATGGACCGCA CGGTGACCCC GAAGGGCCGT
CGTTCCAGCA CCGCCCGTGG CTACCTGGAC CTGGCCAAGC CGCGCCCGAA CCTGACCATC
GTCACCCACG CGCTGACCGA CCGCATCCTG TTCTCGGGCA AGCGTGCGGT GGGCGTGCAG
TGGCTGCACA ACGACCAGCC GCAGCGTGCC ACCGCCCGCC GCGAAGTGCT GCTGTGCGGC
GGCGCCATCG CTTCGCCGCA GATCCTGCAG CGCTCGGGCG TCGGCCCGGC CGACCTGCTG
CGCAGCCTGG ACATCGACCT GGTGCACCAC CTGCCGGGCG TCGGCGCCAA CCTGCAGGAC
CACCTTGAGA TGTACCTGCA GTACGAGTGC AAGAAGCCGG TCTCGCTGGC ACCGGCACTG
AAGCTCTACA ACCAGCCGGC GATCGGCGCC GAGTGGCTGT TCCTTGGCAC CGGCATCGGC
GCCAGCAACC AGTTCGAGGC CGGTGGCTTC ATCCGCAGCG ATACCGAGTT CGACTGGCCG
AACCTGCAGT ACCACTTCCT GCCGGTGGCG ATCAATTACA ACGGCTCCAA CCCGATCAAG
GCGCACAGCT TCCAGATGCA CGTCGGTTCG ATGCGTTCGC CCAGCCGCGG CCGCATCCAC
GTGCGTTCGA AGGACCCGCG CGAACACCCG AGCATCCTGT TCAACTACAT GTCGCACGAC
CAGGACTGGC GCGAGTTCCG TGCCGCGATC CGGATCACCC GCGAGATCTT CGCGCAGCCG
GCGCTGGCGC CGTACAGCGG CCGCGAGATC TCGCCGGGCA GCGCACTGCA GACCGACGCG
CAGATCGATG CATTCGTGCG CGAGCATGCC GAGACCGCCT ACCACCCGTC GTGCTCGAAC
AAGATGGGCC ACGCCGATGA TCCGATGGCG GTGGTTGACG GCCAGGGCCG CGTGCACGGC
CTGGAAGGCC TGCGCATCGT CGATGCCTCG ATCATGCCGC AGGTGGTGAC CGGCAATCTC
AACGCGCCGA CCATCATGAT CGCCGAGAAG CTGGCCGACG TGATCCGCGG CCGTACCCCG
CTGGCCCGCA GCACCGCGCC GTACTACAAG GCCAACGGCG CACCGGTACG TAAGCAGGGC
TGA
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| Protein sequence | MSTHNEYDYI IIGAGSAGNV LATRLTEDAD VSVLLLEAGG PDYRLDFRTQ MPAALAFPLQ
GKRYNWAYKT DPEPFMNNRR MDCGRGKGLG GSSLINGMCY IRGNAMDYDN WASMPGLEDW
TYLDCLPYFR KAETRDIGPN DYHGGEGPLR VTTPKAGNNE LFAAMVEAGV QAGYPRTDDL
NGYQQEGFGP MDRTVTPKGR RSSTARGYLD LAKPRPNLTI VTHALTDRIL FSGKRAVGVQ
WLHNDQPQRA TARREVLLCG GAIASPQILQ RSGVGPADLL RSLDIDLVHH LPGVGANLQD
HLEMYLQYEC KKPVSLAPAL KLYNQPAIGA EWLFLGTGIG ASNQFEAGGF IRSDTEFDWP
NLQYHFLPVA INYNGSNPIK AHSFQMHVGS MRSPSRGRIH VRSKDPREHP SILFNYMSHD
QDWREFRAAI RITREIFAQP ALAPYSGREI SPGSALQTDA QIDAFVREHA ETAYHPSCSN
KMGHADDPMA VVDGQGRVHG LEGLRIVDAS IMPQVVTGNL NAPTIMIAEK LADVIRGRTP
LARSTAPYYK ANGAPVRKQG
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