Gene Smal_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1804 
Symbol 
ID6475757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2024249 
End bp2026114 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content68% 
IMG OID642730986 
Productferrous iron transport protein B 
Protein accessionYP_002028191 
Protein GI194365581 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.529813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0419932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA CTGCCACCAC CGCCCCGCTG CGCATCGCGC TGGTCGGTAA TCCCAACAGC 
GGCAAGACCG CGTTGTTCAA CCAGCTGACC GGCAGCCGGC AGAAGGTCGC CAACTACACC
GGCGTCACCG TCGAGCGCAA GGAAGGCCGC CTGCGCGCGC CGTCCGGCCG CGAATTCGCC
GTGCTCGACC TGCCCGGTGC CTACAGCCTG CATCCAGCCA GCCTGGACGA AGCGATCACC
CGTGACCTGT GCCGGGGCTT CTACCCGGGC GAGGCTGCGC CGGACGTGTT GCTGTGCGTG
ATCGACGCCA CCAACCTGCG CCTGCACCTG CGCTTCGCGC TGGAGTTGCG CGAGCTGGGC
AAGCCAATGG TGGTCGCCCT GAACATGGTC GATGCGGCCC AGCGCCGCGG CATCCAGGTG
GACGTGGCTG CGCTGGAACG CGAACTGGGC GTGCCGGTGG TGGAGACCGT GGCGGTGCGC
AAGCAGGGTG CCAAGGCCCT GGTCGAGCGC CTGGACACCA TGGTGCCGCA CCTGGATGCA
CCGGTGCCGG GCCCGGAAGG CGGCATCGAC TACCACGCCA AGGTGCGCGA GATCCTGTCG
GTGGCCGTGC GCATGCCGGC GCGTACTGCA AAGGTCGACG ACGCGCTGGA CCGCTGGCTG
TTGCACCCGG TGTTTGGGCT GATCAGCCTG GCGGTGGTGA TGTTCCTGAT CTTCCAGGCG
GTGTACGCCT GGGCGACACC GCTGATGGAC GGCATCGAGG CCGGTTTCGC CTGGCTCGCG
ACCTTCGTCG GCAGTGTGTT GCCGGAAGGC CCGCTGGCCA GCCTGCTGAC CGACGGCATC
ATCGCCGGCG TCGGTGGCGT GGTGGTGTTC CTGCCGCAGA TCCTGATCCT GTTCTTCTTC
ATCCTGGTGC TGGAGGAATC CGGCTACCTG CCGCGTGCGG CGTTCCTGCT CGACCGCATG
ATGGCTGCCG CCGGCCTGTC TGGCCGCTCG TTCATCCCGC TGCTGTCCAG CTTCGCCTGT
GCGGTGCCGG GCATCATGTC CACCCGCAGC ATCCAGGACC CGCGTGACCG CCTGGCCACG
ATCCTGGTCG CGCCGCTGAT GACCTGCTCG GCGCGCCTGC CGGTGTATGC GTTGCTGATT
GGCGCGTTCA TCCCTCAGAA GACGGTGTGG GGCGTGTTCA ACCAGCAGGG CCTGGTGCTG
TTCGGCCTGT ATGCGGCCGG CATTCTCAGT GCACTGGCGA TGTCGTGGAT CATGAAGAAG
TGGCGCCGCG ACAAGAGCGA GCACCCGCTG ATGCTGGAGC TGCCGTCGTA CCGCCTGCCG
CATGTGCGCG ACCTGGCGGT GGGCCTGTAC GAGCGCGGCA TGATCTTCCT CAAGCGCGTC
GGCGGCATCA TCCTGGCGCT GACCATCCTG CTGTGGGTGC TGCTGTCGTT CCCGGCGGCC
CCGGTCGGCG CCACCATGCC GGCCATCGAT TACAGCTACG CCGGCCAGAT CGGCCATGCA
ATGGCGGTGT TCTTTGCGCC GCTGGGCTTC AACTGGCAGA TCTGCATCGC GCTGATTCCG
GGCCTGGCCG CGCGCGAAGT GGCGGTGTCC TCGCTGGCCA CCGTGTACGC GCTGTCGGCG
GCCGATGACG ATGCCGCCAG CCAGGCACTG ACCCCGCTGA TCAGCGACGG CTGGTCGCTG
GCCACTGCGC TGTCGCTGCT GGTCTGGTAC ATCTACGCCC CGATGTGCAT CTCGACGCTG
GCCACCATCA AGCGCGAGAC CAATTCGTGG AAGACGATGG CCTTCTCGGC GTTCTACCTG
TTTGCTGCGG CCTACGTGGC GGCGCTGATC ACCTACCAGG TGACCAAGGC GCTGGGGGGC
GGCTGA
 
Protein sequence
MTATATTAPL RIALVGNPNS GKTALFNQLT GSRQKVANYT GVTVERKEGR LRAPSGREFA 
VLDLPGAYSL HPASLDEAIT RDLCRGFYPG EAAPDVLLCV IDATNLRLHL RFALELRELG
KPMVVALNMV DAAQRRGIQV DVAALERELG VPVVETVAVR KQGAKALVER LDTMVPHLDA
PVPGPEGGID YHAKVREILS VAVRMPARTA KVDDALDRWL LHPVFGLISL AVVMFLIFQA
VYAWATPLMD GIEAGFAWLA TFVGSVLPEG PLASLLTDGI IAGVGGVVVF LPQILILFFF
ILVLEESGYL PRAAFLLDRM MAAAGLSGRS FIPLLSSFAC AVPGIMSTRS IQDPRDRLAT
ILVAPLMTCS ARLPVYALLI GAFIPQKTVW GVFNQQGLVL FGLYAAGILS ALAMSWIMKK
WRRDKSEHPL MLELPSYRLP HVRDLAVGLY ERGMIFLKRV GGIILALTIL LWVLLSFPAA
PVGATMPAID YSYAGQIGHA MAVFFAPLGF NWQICIALIP GLAAREVAVS SLATVYALSA
ADDDAASQAL TPLISDGWSL ATALSLLVWY IYAPMCISTL ATIKRETNSW KTMAFSAFYL
FAAAYVAALI TYQVTKALGG G