Gene Smal_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1798 
Symbol 
ID6475751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2020306 
End bp2020872 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content64% 
IMG OID642730980 
Productelongation factor P 
Protein accessionYP_002028185 
Protein GI194365575 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P
[TIGR02178] elongation factor P-like protein YeiP 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.108077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0755621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA ACGACATCAA GAAGGGCAAC GTCGTCGAGT TCAACAACGG CGTGTACCAG 
ATCCGCGACA TCGAGCGCAG CTCGCCGCAG GGTCGCGGCG GCAACGTCCG CTTCCGCTTC
ATCATGTACA GCGTGCCGGG CGGCAACAAG CTCGACGCCA GCTTCGATGC CGACGACAAC
CTGGTCGAAG TCGAACTGCT GCGCCGCCAG TCCACCTATT CGTACAAGGA CGGCGACGCC
TTCGTGTTCC TCGATGACGA GGACTACACC CCGTACACCC TGGATGCGGA CGTGATCGGC
GACGACGCCG GCTACATCAC CGACGGCCTG ACCGGCATCT ACGTGCAGGT GATCGACGAG
CAGCCGGTGG CCATCCAGCT GCCGGCCTCG GTGGTGCTGG AAGTGATCGA GACGCCGCCG
GAACTGAAGG GCGGCACCGC CACCAAGCGC CCGAAGCCGG CCAAGCTCAA CACCGGCATC
GAAATCATGG TGCCGGAGTA CATCGTCAAC GGCGAGCGCG TGCTGGTGAA CACCGCCACC
GGCGAATTCG CTGGCCGTGC CGACTAA
 
Protein sequence
MKANDIKKGN VVEFNNGVYQ IRDIERSSPQ GRGGNVRFRF IMYSVPGGNK LDASFDADDN 
LVEVELLRRQ STYSYKDGDA FVFLDDEDYT PYTLDADVIG DDAGYITDGL TGIYVQVIDE
QPVAIQLPAS VVLEVIETPP ELKGGTATKR PKPAKLNTGI EIMVPEYIVN GERVLVNTAT
GEFAGRAD