Gene Smal_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1786 
Symbol 
ID6475739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand+ 
Start bp2006537 
End bp2007151 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID642730968 
ProductNUDIX hydrolase 
Protein accessionYP_002028173 
Protein GI194365563 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.346997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCG ATAATGAGCA GTATTTTTCC AAACGCCGCC CATTCATGAG CCAGACCGCC 
GAAACCCTTG CCGTGCTTGA CGATCGCCTG CGTGGTCTGC TGCGGGACTA TGCCCGCCGC 
GAGCCCGCCC ACGACGCATT GGCTGCCGAA TTCGGCACAT TGTTGGACGA TCCGGAAGAT 
CCGTTCCGGC GCGAACGACT GGCCGGCCAC TTCACCGCCA GCTGCTGGCT GGTCAGTGCC 
GATGGCCAGC GCCTGCTGCT GACCCACCAC CGCAAGCTGC AGCGCTGGCT GCAGCTGGGC 
GGCCACGCCG ACGGCGACCG CGACCTGGCC CAAGTGGCGC TGAAGGAAGC CGAAGAAGAA 
TCGGGCCTGA GCGGTCTGGT GCTGGAAGAT CCGGCCATCT TCGATATCGA CAAGCATTGG 
ATTCCGGAGC GCAAGGACGT GCCAGGGCAC TGGCACTACG ACGTGCGTTT CGTGATCCGG 
GCGCTGGGTG GCGAGGCCTT CGTGCTCAGC GAGGAGTCGC TGGACCTGGC CTGGCGGCCG 
GTGACCGAAG TCGCGGCCGA TCCGGAATCG GACGAATCCA TGCAGCGCAT GGCGCGCCGG 
TGGTTGACGC GTTGA
 
Protein sequence
MNGDNEQYFS KRRPFMSQTA ETLAVLDDRL RGLLRDYARR EPAHDALAAE FGTLLDDPED 
PFRRERLAGH FTASCWLVSA DGQRLLLTHH RKLQRWLQLG GHADGDRDLA QVALKEAEEE 
SGLSGLVLED PAIFDIDKHW IPERKDVPGH WHYDVRFVIR ALGGEAFVLS EESLDLAWRP 
VTEVAADPES DESMQRMARR WLTR