Gene Smal_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1778 
Symbol 
ID6475731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1996651 
End bp1997877 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content65% 
IMG OID642730960 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_002028165 
Protein GI194365555 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.212898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.77071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT CGCCCGATTT CCGTTCGCCC GCGTTCCTGC GCGCGCACAT CGCCGACACG 
ATGGCGTTCT ACCACCCGCG CTGCATCGAC CCGAAGGGTG GCTTCTTCCA TTATTTCCGC
GACGACGGCA GCATCTACGA TGCCAGCCAC CGCCACCTGG TGAGCAGCAC CCGTTTCGTC
TTCAACTATG CGATGGCCTA CCGTGAATTC GGCAATGCCG AGTACCGCGA GGCGGTCGAG
CATGGCGTGC GCTACCTGCG CGAGGTGCAC CGTAACCCGG CCACCGGCGG CTATGCCTGG
ACCCTGCGCG ACGGCAAGGT CGAGGACGAC ATGAACCACT GCTACGGCGT GGCGTTCGTG
CTGCTGGCCT ACAGCTGCGC ACTGAAAGCC GGTGTCGAGC AGGCCCGCGA GTGGATGGAT
GAGACCTGGC AGCTGCTGGA AGCACGCTTC TGGGAGCCGC AGCACGGCCT GTACAAGGAC
GAGGCTGACG GCCAGTGGAA CTTCACCGGC TACCGTGGCC AGAACGCCAA CATGCACATG
TGCGAGGCGA TGCTGGCCGC GTTCGAGGCC AGTGGCGAGC AGCGCTATGT CGAGCGCGCG
CTGCAGCTGG CCGACAACAT GACCCGCCGC CAGGCCGCCA AGGCCGGTGG CCTGGTCTGG
GAGCATTACG ATTCCAACTG GGAAATCGAC TGGGACTACA ACCTGGACGA CCCCAAGCAC
CTGTTCCGCC CATGGGGCTT CCAGCCGGGG CATCAGACCG AGTGGGCCAA GCTGCTGCTG
ATCCTCGATC GCCACGTGCA GGCCGACTGG CTGGTGCCGA CCGCGCAGCA TCTGTTCGAC
GTGGCCGTAG CGCGCAGCTG GGACGACACC CGTGGTGGCT TGTACTACGG CTTCGCACCT
GAATCGCGGC GGCAGCCGGG CATGGACGGC GCACCGATCG GTGGCGACAG CTTCGTCTGC
GACGACGACA AGTACTTCTG GGTGCAGGCC GAAACGCTGG CCACCGCCGC GTTGATGGCC
AAGCGTACCG GCGACGACCG CTACTGGCAG TGGTACGACC GCTTCTGGGC GTACTCCTGG
GAGCATTTCG TCGATCACCA GTACGGTGCC TGGTTCCGCA TCCTCGATGC GGACAACCGC
AAGTACAGCG ACGAGAAGAG CCCGGCTGGC AAGGTCGATT ACCACACCAT GGGCGCGTGC
TACGAAGTGT TGAACGTCGT GCGTTGA
 
Protein sequence
MSTSPDFRSP AFLRAHIADT MAFYHPRCID PKGGFFHYFR DDGSIYDASH RHLVSSTRFV 
FNYAMAYREF GNAEYREAVE HGVRYLREVH RNPATGGYAW TLRDGKVEDD MNHCYGVAFV
LLAYSCALKA GVEQAREWMD ETWQLLEARF WEPQHGLYKD EADGQWNFTG YRGQNANMHM
CEAMLAAFEA SGEQRYVERA LQLADNMTRR QAAKAGGLVW EHYDSNWEID WDYNLDDPKH
LFRPWGFQPG HQTEWAKLLL ILDRHVQADW LVPTAQHLFD VAVARSWDDT RGGLYYGFAP
ESRRQPGMDG APIGGDSFVC DDDKYFWVQA ETLATAALMA KRTGDDRYWQ WYDRFWAYSW
EHFVDHQYGA WFRILDADNR KYSDEKSPAG KVDYHTMGAC YEVLNVVR