| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1767 |
|---|
| Symbol | |
|---|
| ID | 6475638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1977762 |
|---|
| End bp | 1978760 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642730949 |
|---|
| Product | N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase |
|---|
| Protein accession | YP_002028154 |
|---|
| Protein GI | 194365544 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1446] Asparaginase |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.250239 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGATC GCAGGCAGTT CCTGCAGGCC GGTGCACTGG CCGCAGGCAT GGCGGCATTG
CCGGGCGTGC AGGCACGCAC GCAGGGTGGG GCCAAGGTGG TTTCGACCTG GGACTTCGGC
GTACCGGCCA ACCAGGCCGC ATGGAAGGTA CTGGCGCAGG GCGGCAGCGC GCTGGATGCG
GTCGAAGCGG GCGCACGCTG GGCCGAGAGC GAGTTGTGCA ACCCCACCGT CGGCCATTGC
GGCAATCCGG ATCGCGACGG CGTGCTGAGC TTGGACGCGA GCATCATGGA CGGCGATGGC
CGTTGTGGTG CAGTGGCCGC GCTGGTCGAC ATCCTGCATC CGGTGTCGGT GGCCCGCAAA
GTGATGGAGA ACAGCCCGCA CGTGCTGCTG GTGGGCGAGG GCGCGCAGCA GTTCGCGGTG
CAGCAGGGTT TCGAGCGCAA GCACCTGCTG ACGCCGCAGG CTGAAGCCGC CTGGCACGAG
TGGCTGAAGA CCGAGAAGTA CCAGCCGCAG ATCAATGCCG AGCGCCGCGG TATTCCCGGC
AACAGCGACA ACCACGACAC CATCGGCATG CTGGCACTGG ATGCCAAGGG CCACCTGGCC
GGTGCCTGCA CCACCAGCGG CATGGCCTGG AAACTGCATG GCCGCGTCGG CGACAGCCCG
ATCATCGGTG CCGGCCTGTA CGTCGACAAC GACGTGGGTG CAGCCACTGC CTCGGGCGTG
GGCGAGGAGA TGATCCGCAA TGCCGCCTCG TTCCTGGTGG TCGAGCTGAT GCGCCAGGGG
CGCTCGCCGG CGCAGGCCTG CCGTGAAGCA ATTGACCGCG TGGTGCGCAA GCGCCCCGAA
GCGAGCAAGA CACTGCAGGT CTGCTTCCTG GCCATGAACA AGCAGGGTGA GGTGGGCGCT
TACGCGCTGC ATCGCGGTTT TGTCTACGCC GTGTGCGATG CGCAGCGCCA GGATGACCTG
CGTGATTCGC CGTCGATCTA CACGAGCACC CAGACGTGA
|
|---|
| Protein sequence | MVDRRQFLQA GALAAGMAAL PGVQARTQGG AKVVSTWDFG VPANQAAWKV LAQGGSALDA
VEAGARWAES ELCNPTVGHC GNPDRDGVLS LDASIMDGDG RCGAVAALVD ILHPVSVARK
VMENSPHVLL VGEGAQQFAV QQGFERKHLL TPQAEAAWHE WLKTEKYQPQ INAERRGIPG
NSDNHDTIGM LALDAKGHLA GACTTSGMAW KLHGRVGDSP IIGAGLYVDN DVGAATASGV
GEEMIRNAAS FLVVELMRQG RSPAQACREA IDRVVRKRPE ASKTLQVCFL AMNKQGEVGA
YALHRGFVYA VCDAQRQDDL RDSPSIYTST QT
|
|---|
| |