Gene Smal_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1736 
Symbol 
ID6475607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1946556 
End bp1947719 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content65% 
IMG OID642730918 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002028123 
Protein GI194365513 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.513446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCTG ATGCCTCTAC GACGTCCGTG CTGACGGACC CTTCTCGCCA ACTGCGACTG 
CTGATCGACA GCGTGCGCGA CCATGCGCTG TACCTGCTTG ATCCTGATGG CATCGTCTGC
AGCTGGAACC CGGGCGCGGA GCGCATCAAG GGCTATTCAG CCGATGAAGT GGTCGGCACG
CACTTTGGCC GTTTCTATCT GGCTGCCGAT CGCGAAGCCG GGGAACCGCA GCGCTTGCTC
CGCCTCGCAG CGCAGCAGGG CCACGTCGCC AGTGAAGGCT GGCGAGTGCG CCGCGATGGC
TCGTCTTTCC GTGCCAGCGT GGTCATCGAG CCGGTCGTCG AAGCGGGCGA GCTACTCGGC
TTCGTCAAGA TCACCCGCGA CATCACCGAG CAGTGGCAGG CACAGCGGTT GCTGCGTGAT
GCCCAGCGCG CGCTGCGCAA TACCCAACAG TTCGAGACGG TCGGCCGCCT CAGCCGCGGG
CTGTCGCACG AGTTCAATAA TCTGCTGACC ACCATCGGCA ACGCACTGGA CCTGCTGTCC
CTGCGCGTGA ACGGTGACGA TGCGCGCGCC GCCGAGCTGC TTGATGCGGC GCAGACTGCG
ACCGATCGCG GTGCACTGCT GACCCGCCAG CTGTTGGCCT TCAGCACCGG GCAGACCCTG
ATCCGCGAAC CACTGGATAT CAATGCGCTG ATACGGCAGT GGCTGCCGGA CCTGCAACGC
GCCTGCCCGC CCACGGTGGT GCTGGATGCG CAGCTTGCGC CCGGCCTGCC TGCGATCAAC
ACCGATGCGC TGCAGCTGCA GACGGCGCTG GCCAATCTGG TCGCCAATGC CGCAGATGCT
ACCCTTGAAG GCGGCCGCAT CCTGATCGGC ACTGCACTGG AGCATCGCCT CGACCCGGAT
GCGGACTCCA CGCTGCAACG TGGCTATGTC ACCCTCAGCG TCTGCGACGA GGGCCATGGC
ATGGCCGCTG ATATCGCCGA ACGGGCAACC GAACCGTTCT TCACCACCAA GGACATCGGC
AAAGGCAGCG GCCTGGGCCT GAGCCAGGTG TTCGGATTCA CTACCCAGAG CGGCGGCTTC
GTCGACGTGT CCACCACGCC CGGTGTCGGC ACCACGGTCA GCCTGCTGCT TCCCGCAATG
GAGGAACCTG CCCATGACCG ATGA
 
Protein sequence
MDADASTTSV LTDPSRQLRL LIDSVRDHAL YLLDPDGIVC SWNPGAERIK GYSADEVVGT 
HFGRFYLAAD REAGEPQRLL RLAAQQGHVA SEGWRVRRDG SSFRASVVIE PVVEAGELLG
FVKITRDITE QWQAQRLLRD AQRALRNTQQ FETVGRLSRG LSHEFNNLLT TIGNALDLLS
LRVNGDDARA AELLDAAQTA TDRGALLTRQ LLAFSTGQTL IREPLDINAL IRQWLPDLQR
ACPPTVVLDA QLAPGLPAIN TDALQLQTAL ANLVANAADA TLEGGRILIG TALEHRLDPD
ADSTLQRGYV TLSVCDEGHG MAADIAERAT EPFFTTKDIG KGSGLGLSQV FGFTTQSGGF
VDVSTTPGVG TTVSLLLPAM EEPAHDR