Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1736 |
Symbol | |
ID | 6475607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1946556 |
End bp | 1947719 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642730918 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002028123 |
Protein GI | 194365513 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.513446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACGCTG ATGCCTCTAC GACGTCCGTG CTGACGGACC CTTCTCGCCA ACTGCGACTG CTGATCGACA GCGTGCGCGA CCATGCGCTG TACCTGCTTG ATCCTGATGG CATCGTCTGC AGCTGGAACC CGGGCGCGGA GCGCATCAAG GGCTATTCAG CCGATGAAGT GGTCGGCACG CACTTTGGCC GTTTCTATCT GGCTGCCGAT CGCGAAGCCG GGGAACCGCA GCGCTTGCTC CGCCTCGCAG CGCAGCAGGG CCACGTCGCC AGTGAAGGCT GGCGAGTGCG CCGCGATGGC TCGTCTTTCC GTGCCAGCGT GGTCATCGAG CCGGTCGTCG AAGCGGGCGA GCTACTCGGC TTCGTCAAGA TCACCCGCGA CATCACCGAG CAGTGGCAGG CACAGCGGTT GCTGCGTGAT GCCCAGCGCG CGCTGCGCAA TACCCAACAG TTCGAGACGG TCGGCCGCCT CAGCCGCGGG CTGTCGCACG AGTTCAATAA TCTGCTGACC ACCATCGGCA ACGCACTGGA CCTGCTGTCC CTGCGCGTGA ACGGTGACGA TGCGCGCGCC GCCGAGCTGC TTGATGCGGC GCAGACTGCG ACCGATCGCG GTGCACTGCT GACCCGCCAG CTGTTGGCCT TCAGCACCGG GCAGACCCTG ATCCGCGAAC CACTGGATAT CAATGCGCTG ATACGGCAGT GGCTGCCGGA CCTGCAACGC GCCTGCCCGC CCACGGTGGT GCTGGATGCG CAGCTTGCGC CCGGCCTGCC TGCGATCAAC ACCGATGCGC TGCAGCTGCA GACGGCGCTG GCCAATCTGG TCGCCAATGC CGCAGATGCT ACCCTTGAAG GCGGCCGCAT CCTGATCGGC ACTGCACTGG AGCATCGCCT CGACCCGGAT GCGGACTCCA CGCTGCAACG TGGCTATGTC ACCCTCAGCG TCTGCGACGA GGGCCATGGC ATGGCCGCTG ATATCGCCGA ACGGGCAACC GAACCGTTCT TCACCACCAA GGACATCGGC AAAGGCAGCG GCCTGGGCCT GAGCCAGGTG TTCGGATTCA CTACCCAGAG CGGCGGCTTC GTCGACGTGT CCACCACGCC CGGTGTCGGC ACCACGGTCA GCCTGCTGCT TCCCGCAATG GAGGAACCTG CCCATGACCG ATGA
|
Protein sequence | MDADASTTSV LTDPSRQLRL LIDSVRDHAL YLLDPDGIVC SWNPGAERIK GYSADEVVGT HFGRFYLAAD REAGEPQRLL RLAAQQGHVA SEGWRVRRDG SSFRASVVIE PVVEAGELLG FVKITRDITE QWQAQRLLRD AQRALRNTQQ FETVGRLSRG LSHEFNNLLT TIGNALDLLS LRVNGDDARA AELLDAAQTA TDRGALLTRQ LLAFSTGQTL IREPLDINAL IRQWLPDLQR ACPPTVVLDA QLAPGLPAIN TDALQLQTAL ANLVANAADA TLEGGRILIG TALEHRLDPD ADSTLQRGYV TLSVCDEGHG MAADIAERAT EPFFTTKDIG KGSGLGLSQV FGFTTQSGGF VDVSTTPGVG TTVSLLLPAM EEPAHDR
|
| |