Gene Smal_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1713 
Symbol 
ID6475583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1927664 
End bp1928380 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content67% 
IMG OID642730894 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002028100 
Protein GI194365490 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGA TGATCATCGG CGCCAGCCGG GGCCTGGGGC GCGCGTTCGT GGAAGGCCTG 
TGCGGCCCAG GTGACACCGT CATCGGTGTC TCGCGTACCC GCCCACGCGA CATCGCCTGC
CCCGAAGGCG TCACCCTGCA ATGGATCGAA GCAGACCTGT CCCAGCCGAC CGTGGCTGCC
GACCACATCG CGGCGCAGGC ACCGGCCGAT ATCGATGTGC TGATCCACAA CCTGGGCATC
TGGGAAGACA GGGCCTTCAG CGACGCGTAC GACTTCCTCG ATGAAAGTGA TGCGGCGCTC
ACGCAGCTGG TCGACGTCAA CATCAGCGCG ACCCTGGTGC TGCTGCAGCG CCTGTTGCCC
CGCGTGCTGA CCTCGCCGCG TCCGCAGCTG GTGCTGACCG GCTCGACCTC CGCGCTGCCG
CGCAGTGGCC GCCCGGAAGT GGCATTCGGC GCCTCCAAGT TCGCCCTCAA CGGTATTGCC
GATGCGTTGC GCGAAGGCTT CCGCGACCGT CGGCTGGCGG TGACCAGCTT GCAGCTGGGG
TATCTCAATA CCGACGATGC GCTTTCGGTG CCGGTATCCG AAGCCGCCAC ACGCGGTGAA
GGCGAGCTGG TGCCGGTGCA TGACGTGGTG ACGATGGTGC GGGCGCTGCT GCAGCTGTCA
CCGTCCGGCT TCGTGCGCGA GCTGGTACTG CCGGCCATCG CCGACCCGCG CTACTGA
 
Protein sequence
MKLMIIGASR GLGRAFVEGL CGPGDTVIGV SRTRPRDIAC PEGVTLQWIE ADLSQPTVAA 
DHIAAQAPAD IDVLIHNLGI WEDRAFSDAY DFLDESDAAL TQLVDVNISA TLVLLQRLLP
RVLTSPRPQL VLTGSTSALP RSGRPEVAFG ASKFALNGIA DALREGFRDR RLAVTSLQLG
YLNTDDALSV PVSEAATRGE GELVPVHDVV TMVRALLQLS PSGFVRELVL PAIADPRY