Gene Smal_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1712 
Symbol 
ID6475582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1926159 
End bp1927670 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content65% 
IMG OID642730893 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002028099 
Protein GI194365489 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTC CCTATTCGCG GGCTGCCGAA TCGTCCGCTC GGGGGCTGGT CCTTGCCGGC 
TGCCTGACCG CCCTCATCAT TCCACTGAGC ATCGCCAGCC CCGCGGTGGC CATCCCTGCG
ATACGTGCTG CATTGGGCGG GTCTCCCGCA GAGCTGTCCT GGATGATCAA CGCCTATCTG
CTGACCTACG GCAGTACGAC GCTGGTGGCC GGTGGATTGG CCGATCTGTA CGGCAGGCGC
AGGATCTGGA TCCTGGGTGC CCTGCTGTTT GCGATCGTCA CCGGCCTGAT TCCCTTGATG
CCCGATGTGG CATGGATGAA TGGCATGAGG CTGCTGCAGG GAATGGCCGC GGCGGCAGCG
TTTGCCGGCG CGATGGCGTC GTTGGCACAG GTGTTCGACG GCCAGGCGCG GGCCAGGGTG
TTCAGTCTGA TCGGGACCAC CTTCGGCGCA GGGGCTGCGG GCGGGCCCTT GCTGGCCGGC
GGGCTGATCG ATGGCCTGGG CTGGGAGTGG GTGTTCTTTC TGCCCGCGCT GCTGGCCGCG
TTGACCGTAC CGTTGATCGC CGTTACATCC GTCGAATCGA AGAATTCAGG CTCGCCCCGG
TTGGATTGGC TGGGGGCGGC AACCTTCACG CTTTCCCTGG GTTCACTCAC CTACGCGATG
ATCGTGCTTC CAGAGTTCGG TGGACTGCAT CCGCAGACGC TTGTACCGCT ACTGCTCTCG
GTCGTTCTGC TGGCAGCATT CATTGCGGTG GAGCGGTCCC ATCGCACGCC GCTGCTGGAC
CTCGAACTGC TCCGCAACCG GCGCTTTGTC GGGGTGCAGA TTCTGGCCGT GGCGCCCGCG
TTCTGCTACG TGGTGCTGCT GGTCATGCTG CCGGCGGGCT TCATTGGTGT GGAAGGCCTG
CGGCCAACCG AAGCCGGGCT GGCGATGGCA GCATTGTCGG GTCCATTGCT TGTCGTTCCG
CTGGCGTCCG GTTATCTGCT GCGATGGATT CCCGCGCGGG CGTTGTGCTG TGCCGGTCTG
TTGATCGCTG CGGCTGGTCT CGCGTGGCTG GCACAGGTGT TCGAGTCCCC GCCGCAACGG
TGGATGCCGA TGTTGGCCAT CGGTATCGGT ATCGGGCTTC CGTGGGGAAT CATGGATGGT
CTTGCGGTCA GCGTGGTCGG CAAGGAGCAG GCAGGCATGG CTGCTGGCAT CTTCAACGCG
ATGCGATTGG CCGGTGATGC AATCGCGCTC GCCGTGGTCG GCATCATGCT CTCGGCCGGT
ATCAGTCGGA GCATGATGCT GGAGGTCGGT CACGTGGCCC GTGCCACATC GCACAAGCTG
TCCATGGGCG ACCTTGCCGG TGTTGCGCAG GAGCTGCCCG GCGTATCCAG AACGGTTCTG
GCCCAGGCGT ACCTGGGCGC GGTCCACAGC CAGCTGTTGA TCCTGGCCGC TGCCACGGTA
ATTTCAGCCC TCGTGCTGTG GTACCTGCTG CGCGACGAGG TTGAGCCCAC GCCGGGCCGA
TGCAGTCAGT AG
 
Protein sequence
MSVPYSRAAE SSARGLVLAG CLTALIIPLS IASPAVAIPA IRAALGGSPA ELSWMINAYL 
LTYGSTTLVA GGLADLYGRR RIWILGALLF AIVTGLIPLM PDVAWMNGMR LLQGMAAAAA
FAGAMASLAQ VFDGQARARV FSLIGTTFGA GAAGGPLLAG GLIDGLGWEW VFFLPALLAA
LTVPLIAVTS VESKNSGSPR LDWLGAATFT LSLGSLTYAM IVLPEFGGLH PQTLVPLLLS
VVLLAAFIAV ERSHRTPLLD LELLRNRRFV GVQILAVAPA FCYVVLLVML PAGFIGVEGL
RPTEAGLAMA ALSGPLLVVP LASGYLLRWI PARALCCAGL LIAAAGLAWL AQVFESPPQR
WMPMLAIGIG IGLPWGIMDG LAVSVVGKEQ AGMAAGIFNA MRLAGDAIAL AVVGIMLSAG
ISRSMMLEVG HVARATSHKL SMGDLAGVAQ ELPGVSRTVL AQAYLGAVHS QLLILAAATV
ISALVLWYLL RDEVEPTPGR CSQ