Gene Smal_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1708 
Symbol 
ID6475578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1921338 
End bp1922414 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content67% 
IMG OID642730889 
Producthypothetical protein 
Protein accessionYP_002028095 
Protein GI194365485 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC TGCTCCTTGT CCTTTTGCTT GGAATCCTCG CCGTGACCGC CTACACCTTC 
TGCAAGTCCT GGTCCCTCCC CGACTTCCCC GAATCGCCGC AGTACCGCGA CGGCAAGTTC
CGTAATGCCC TGCCGCGTCC GGCGATGGGC CTGCGCGATG GCGCGGAGAT CTGGTGGACG
TTCCTGTTCA ACAAGCCCAA GGGCACCGTG CCCGCCCACC CCATTCCGGT GCTGCCGCTG
GACCGCGCCA CCCTGGACGC CGCGCCTGAT CGCAGCCTGT TCCGGCTTGG GCATTCCACG
ATCCTGCTGA AGCTGCGCGG GCAGTACTGG CTGACCGATC CGGTGTTCTC CGAGCGCGCT
TCGCCGGTGC AATGGATGGG CCCGGCCCGC TTCCACGCGC CGCCGATCAG CATCGACCAA
CTGCCGCCGA TCGCCGGCGT GATCCTCTCG CACAACCACT ACGACCACCT GGACCATGCC
GCGGTGATGC AGCTGGCCGG CAAGACCGCG CGCTTCATCG CACCGCTGGG TGTGGGCGAC
CAGCTGATTG CGTGGGGCGT GGACGCCAGC AAGGTGGAAC AGCTGGATTG GTGGCAGTCC
ACCGAAGCCA GCGGCCTGCG CCTGACCGCC ACCCCGGGCC AGCATTTCTC CGGCCGTGGG
CTGGGCGACA GCGATCGCAG CCTGTGGGCG TCGTGGGTGA TCCAGGACGG CGACTTCCGC
ATCTTCTTCA GTGGCGATAC CGGCTACTTT GACGGTTTCA AGGCCATCGG TGAGAAGTAC
GGCCCGTTCG ACCTGACCAT GATCGAAACC GGTGCCTACG ACCCGCGCTG GGCGTTCGTG
CACATGCAGC CCGAACAGAC CCTGCAGGCG CACCTGGACT TGCGCGGCAA GTGGCTGCTG
CCGATCCACA ACGGCACCTT CGACCTGGCC CTGCACGAAT GGCAGCAGCC CTTCGAACGC
ATCACCGCCT TGGCGGAGGC AAACAGCGTG CCGGTCGCCA CGCCGATGAT GGGCGAAGCG
CTGGACATGC AGGCGCCTAG CGCCGGCACG CGCTGGTGGG AGCAGGTGCA GCTGTAA
 
Protein sequence
MKRLLLVLLL GILAVTAYTF CKSWSLPDFP ESPQYRDGKF RNALPRPAMG LRDGAEIWWT 
FLFNKPKGTV PAHPIPVLPL DRATLDAAPD RSLFRLGHST ILLKLRGQYW LTDPVFSERA
SPVQWMGPAR FHAPPISIDQ LPPIAGVILS HNHYDHLDHA AVMQLAGKTA RFIAPLGVGD
QLIAWGVDAS KVEQLDWWQS TEASGLRLTA TPGQHFSGRG LGDSDRSLWA SWVIQDGDFR
IFFSGDTGYF DGFKAIGEKY GPFDLTMIET GAYDPRWAFV HMQPEQTLQA HLDLRGKWLL
PIHNGTFDLA LHEWQQPFER ITALAEANSV PVATPMMGEA LDMQAPSAGT RWWEQVQL