Gene Smal_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1707 
Symbol 
ID6475577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1920372 
End bp1921115 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID642730888 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002028094 
Protein GI194365484 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG CTTCCTCAGC CCCCGTTGCC CTTGTCACCG GCGGCTCGCG CGGTATCGGT 
GCCGCCATCT CCCGCCGCCT CGCCGCCGAT GGCTTCTCGG TTGCCATCAA CTATGCCGGC
CGTCACGAAG AAGCCGAAGC ACTGGCCGCC GAACTGATGG CCAACGGCGG CCAGGCCATC
GCACTTCAAG CCGATGTTGC CAATCCTCAG GCGGTGCAAT CCCTGTTCAA TGCCATTGAG
GCCCGCTTCG GCGGTATCGA TGTGGTCGTG CACAGTGCCG GGGTACTGGA ACTCGCTGCG
CTGGCCGAAA GCGAAGACGC GCTGTTCGAC CGCCTCATCG CCATCAACCT GAAGGGTGCG
TTCAATGTGC TGCGCGAGAG CGCACGACGG GTTCGCGATG GCGGCCGCAT CGTCACCCTG
TCCACCAGCG TGGTCGGATT CAAGCTCGAG CGTTATGGCG TCTATGCGGC AAGCAAGGCG
GCGGTGGAAA CCATGAGCGC CATCCTCAGC AAGGAGCTGC GCGGCCGCGG CATCACCGTG
AACGCCGTCG CACCGGGCCC GACGGCAACG AGCCTGTTCC TGGAAGGCAA GTCAGCCGAA
CTGATCGACC GGTTGGCAAA GATGAGCCCG CTTGAACGCC TGGGTACGCC GGATGACATC
GCCGCTGCTG TGGCCTTCCT GGCCGGTACC GACGGCGGGT GGATCAACGG TCAGGTTCTG
CGTGCCAACG GCGGCGCGGT CTGA
 
Protein sequence
MNIASSAPVA LVTGGSRGIG AAISRRLAAD GFSVAINYAG RHEEAEALAA ELMANGGQAI 
ALQADVANPQ AVQSLFNAIE ARFGGIDVVV HSAGVLELAA LAESEDALFD RLIAINLKGA
FNVLRESARR VRDGGRIVTL STSVVGFKLE RYGVYAASKA AVETMSAILS KELRGRGITV
NAVAPGPTAT SLFLEGKSAE LIDRLAKMSP LERLGTPDDI AAAVAFLAGT DGGWINGQVL
RANGGAV