| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1705 |
|---|
| Symbol | |
|---|
| ID | 6475575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1918941 |
|---|
| End bp | 1919834 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642730886 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002028092 |
|---|
| Protein GI | 194365482 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACACA CCATCCTGAT CACCGGCGCA TCCTCCGGCT TCGGCCTGAT GACCGCCAAG
GCACTGGCCC TTGCCGGCCA CGTCGTCTAC GCCTCGATGC GCGAAACACG CGGGCGCAAT
GCAACGCGGG TGGCCGACAT CGCACAGTGG GCAGACGCGC ATCACGCCGA CCTTCGCAGC
GTCGAACTGG ACGTACAGTC GGACGCGTCC AGCCAGGCGG CGGTCGAACA GGTGCTGACC
GACGCAGGCG CGCTCGACGT CATCGTGCAT AACGCCGGGC ACATGGTGTT CGGGCCGGCT
GAAGCGTTCA CCCCGGAACA GCTGATGCAG CAGTACGACG TCAACGTACT GGGCACACAG
CGGGTGAACC GCGCCGCGCT TCCGCACCTG CGCCGCCGTG GCAACGGCCT GCTCGTCTGG
ATCGGCTCGT CCTCCACACG CGGTGGCACT CCTCCGTTCC TTGCGCCCTA TTTCGCCGCC
AAGGCAGCCA TGGATGCACT GGCCGTGTCC TATTCAACCG AACTGTCGCG GTGGGGCATC
GAGACCACCA TCATGGTGCC GGGTGCATTC ACCAAGGGCA CCAACCATTT CCTGCATTCG
GGCACGCCCG CCGATACCGC CATCGCGGCC GACTATGAGA ACGGTCCCTA CGCCGGTGTC
GCCGACCAGG CGCTGAAGGG CCTGGTAGGG TTGGAGCCTG CAGATGCCGA TCCCGAGGAG
GTCGCGCGGC AGATCGTGCG GGTCGTGGGC CTGCCACACG GACATCGGCC GTTCCGGGTA
CATGTAGACC CCTCACAGGA CGGCGCCGAA GTGGTCAATG CCGTTGCCGA TCGCATGCGA
CGCGAGATGT ACACCGCCAT CGGTCTCGCA GACCTGCTCT CGCCACGAGG CTGA
|
|---|
| Protein sequence | MSHTILITGA SSGFGLMTAK ALALAGHVVY ASMRETRGRN ATRVADIAQW ADAHHADLRS
VELDVQSDAS SQAAVEQVLT DAGALDVIVH NAGHMVFGPA EAFTPEQLMQ QYDVNVLGTQ
RVNRAALPHL RRRGNGLLVW IGSSSTRGGT PPFLAPYFAA KAAMDALAVS YSTELSRWGI
ETTIMVPGAF TKGTNHFLHS GTPADTAIAA DYENGPYAGV ADQALKGLVG LEPADADPEE
VARQIVRVVG LPHGHRPFRV HVDPSQDGAE VVNAVADRMR REMYTAIGLA DLLSPRG
|
|---|
| |