Gene Smal_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1682 
Symbol 
ID6475552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1895255 
End bp1896037 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID642730863 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_002028069 
Protein GI194365459 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGTG GAAAGGTCGC GGTGGTTACC GGCTCCACAA GCGGTATCGG TCTTGGCATT 
GCCACGGCGC TGGCGCGGCA AGGCGCCGAC ATCGTGTTGA ACGGATTCGG CGATGCGGCG
GAGATCGAAC GTATCCGTTC CAACCTGGAA GCCGAGTTCG GTGTTCGCGT GGCGCATGAC
GGTGCCGACC TGTCCCGTGG CGAGGCAGTG CGCGGGATGA TCGACCACGC CGTTGCGAAG
ATGGGGCGCA TCGACATTCT GGTGAACAAC GCGGGCATCC AGCACACCGC GTCGATCGAG
GAATTCCCCA CAGAGAAATG GGATGCGATC ATCGCGCTGA ATTTGTCGGC GGTGTTCCAT
GCAACGGCGG CAGCCTTGCC CCACATGAAG CGGCGGGGCG CCGGCCGCAT CATCAACATC
GCATCCGTGC ACGGGTTGGT GGGCTCGGTG AACAAGTCGG CCTACGTGGC GGCCAAGCAT
GGCGTGGTGG GGTTCACCAA GGTGACCGCG CTGGAGAACG CGGGCACTGG CATCACCGCC
AACGCGATCT GCCCGGGTTG GGTGCGAACT GCGCTGGTCG AGCAGCAGAT CACCGCGTTG
GCCGAGCGCG AAGGCACGGA TCAGGAGACC GCTGCGCGTG CGCTGGTGGC CGAGAAACAG
CCCTCGCTGC AGTTCGTGAC GCCCGAGCAG CTGGGGGAAA TGGTGGTGTT CCTGGCCTCG
GACGCCGCGG CGCAGATCAC CGGCACGGCG TTGCCGGTCG ATGGTGGCTG GACCGCCCGC
TAG
 
Protein sequence
MFSGKVAVVT GSTSGIGLGI ATALARQGAD IVLNGFGDAA EIERIRSNLE AEFGVRVAHD 
GADLSRGEAV RGMIDHAVAK MGRIDILVNN AGIQHTASIE EFPTEKWDAI IALNLSAVFH
ATAAALPHMK RRGAGRIINI ASVHGLVGSV NKSAYVAAKH GVVGFTKVTA LENAGTGITA
NAICPGWVRT ALVEQQITAL AEREGTDQET AARALVAEKQ PSLQFVTPEQ LGEMVVFLAS
DAAAQITGTA LPVDGGWTAR