Gene Smal_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1676 
Symbol 
ID6475546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1887911 
End bp1889320 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content47% 
IMG OID642730857 
Producthypothetical protein 
Protein accessionYP_002028063 
Protein GI194365453 
COG category[S] Function unknown 
COG ID[COG4487] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.729068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGA TTATCTGTCC GCACTGCTCC AAAGCCTTCA AGATTGACGG CTCTGGCTAT 
GCGGCAATCC TAAAGCAAGT CCGAGATGCC GAATTTGAAA GACAGCTTCG AGAGCGGCTT
GACCTAGCCG AGCAAGAGAA GAGAAGCGCC GTTGAACTTG CCGTAGCAGC GAGCACAAGA
GAACTTCAAA AGAAGCAATT CGACAAGGAT CGCGAGATAC AAAGACTACA ATCAAAAGTC
GAGGCAGAGG AAACTGCTCG ACAGCTAGCT GTCCGCGAAG CGCTTGACGG CATAGAGAAG
CAGCGCGATG ACTTAGCGAG ACAGCTTGAA CAAACGCGAT CAGATAACGC GAGCGCGCTG
AGCTTGATGC AAGCAAAGCT ATCACGAGAC CTGGCCATTG CAACGTCGTC TAAGGATCGC
GAGATCCAAG AATTAAAGAA TCAGCTCGAC AACTCTAAAG CAAGCAACAA ATTGGAAATC
TTCCAAGCAG TTGACAAGGA AGTGAAGCAG GCCCAGGAAC TTCGAAGTCA ACTTGAAAAA
TCCGAGCTTG AACGCCTTCT TGCAGAGAAG TCTTTAAAGG ACAAGTATGA CACCTTACTT
AGGGATCGCG ATGAGTCCAT AGAGAGACTA CGTGACATGA AGGTGCGACT TTCCACCAAG
ATGCTGGGAG AAACACTCGA GCAACATTGC GAGAATGAGT TCAACAGGAT CCGCGCGACC
GCCTTTCCGA CGGCATACTT TGAAAAGGAT AATGATGCGC GATCTGGCAG CAAAGGTGAT
TATATTTTTC GCGACACCGA TGTATCCGGC GTCGAGATCA CCTCGATCAT GTTTGAGATG
AAGAATGAAG CAGATCGAAC TTCAACTAAA AGCAAGAACG AAGACTTCCT CAAAGAGCTC
GACAAAGATC GCTCCCAGAA AGGGTGTGAG TACGCAGTCC TGGTTTCACT CCTTGAGCCA
GACAGTGACC TATACAACAC AGGGATCGTC GACGTCTCGC ACCGGTACGC AAAGATGTAC
GTTATCAGAC CACAGTTCTT CATACAGTTG ATTGCATTAA TCAGAAACGC ATCACTCAAT
TCACTAAAAT ATAGGTCTGA GCTTGCGCTG ATGAAAGCCC AGAACATTGA CATAACAAAC
TTCGAGGATC AACTGGACTC ATTCAAGTCA GCCTTTTCAA AGAATTACGA CCTGGCGACC
AAGAGATTTC AGACTGCCAT CATTGAAATT GATAAGTCAA TTGACCATCT ACAGAAGACG
AAAGACGCAC TATTGGGGAC GGATCGAAAT CTCCGGCTGG CCAACGATAA GGCCCAAGAC
GTTACAATCA AAAAGCTCAC CAAGGGAAAC CCAACAATGG CGTCCAAGTT CAATGATCTC
AAAGGAGATG GCCAACAAAA CTCCAAGTAA
 
Protein sequence
MPEIICPHCS KAFKIDGSGY AAILKQVRDA EFERQLRERL DLAEQEKRSA VELAVAASTR 
ELQKKQFDKD REIQRLQSKV EAEETARQLA VREALDGIEK QRDDLARQLE QTRSDNASAL
SLMQAKLSRD LAIATSSKDR EIQELKNQLD NSKASNKLEI FQAVDKEVKQ AQELRSQLEK
SELERLLAEK SLKDKYDTLL RDRDESIERL RDMKVRLSTK MLGETLEQHC ENEFNRIRAT
AFPTAYFEKD NDARSGSKGD YIFRDTDVSG VEITSIMFEM KNEADRTSTK SKNEDFLKEL
DKDRSQKGCE YAVLVSLLEP DSDLYNTGIV DVSHRYAKMY VIRPQFFIQL IALIRNASLN
SLKYRSELAL MKAQNIDITN FEDQLDSFKS AFSKNYDLAT KRFQTAIIEI DKSIDHLQKT
KDALLGTDRN LRLANDKAQD VTIKKLTKGN PTMASKFNDL KGDGQQNSK