| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1629 |
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| Symbol | |
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| ID | 6475499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1832265 |
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| End bp | 1833641 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642730811 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_002028017 |
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| Protein GI | 194365407 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.606016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.220561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT TCTCGACCCT GCCGCTGAGC CCGGCCCTGC AGCCCGGCCT GGATGCCCTC
GGCTACACCA CTCTCACCCC CGTGCAGGCG CAGAGCCTGC CGGCCATCCT CGATGGCCGC
GATGTGATCG CACAGGCGCC AACCGGCAGC GGCAAGACCG CCGCCTTCGG CCTGGGCCTG
CTGCAGGCGA TCGACCCCAG CCTGATCCGC GTGCAGGCGC TGGTGCTGTG CCCGACCCGC
GAACTGGCCG ACCAGGTCGG CAAGCAGATC CGCAAGCTGG CCACCGGCAT TCCCAACCTG
AAGCTGTTGC TGCTGGTCGG CGGCGTGCCG CTGGGCCCGC AGCTGGCGTC GCTGGAAGGC
CACGACCCGC ACGTGGTGGT CGGCACGCCC GGCCGCGTGC AGGAGCTGGC ACGCAAGCGC
GCGCTGAATC TTGGCGCGGT GCGCACGCTG GTGCTGGACG AGGCCGACCG CATGCTCGAC
ATGGGCTTCG AGGAGCCGAT CCGCGAGATC GCCGGCCGCA CCCACAAGGA CCGCCAGAGC
CTGCTGTTCT CCGCCACCTT CCCGGACAGC ATCCGCGCCA TGGCGCGTGA CCTGCTGCGC
GAGGCAGTGG AAGTGACCGT GGAAGGCGCC GACCAGGCAC CGGCCATCCG CCACATGTTC
TGCGAGGTGG AACCGGCGCA CCGCCAGAAG GCACTGGCCG GCCTGCTGCT GAAGTACACG
CCGGAATCGG CGGTGGTGTT CTGCAACACC CGCAAGGACG TGGACGAAGT AGCCAACTCG
CTGCAGCAGT TCGGCTTCTC CGCACTGGCC CTGCACGGCG ACATGGAGCA GCGCGACCGC
GAGGAAGTCT TGTTGTTGCT GGCCAACCGC AGCTGCAACG TGTTGGTGGC CAGCGACGTG
GCCGCACGCG GCCTGGACGT GGAAGAGCTG GCGGCGGTGA TCAACTACGA GCTGCCGACC
GACGTGGAGA GCTATCAGCA CCGCGTGGGC CGTACTGGCC GTGCCGGTGC CAGCGGCCTG
GCGATCAGCC TGGTGGCCGG CCGCGAGAAG ACCCGCGCCG AAGCCATCGA AGCGCAGATG
GGGCAGCCGC TGGACTGGCA GAAGACGCCG CTGGCGACTT CGCGCCCGGC CGAGCTGCCG
CAGGCCGCGA TGCGCACGCT GCGTATCGAC GGTGGCAAGA CCGACAAGCT GCGCCCGGGC
GATATCCTCG GTGCACTGAC CGGCGACGCC GGCCTGTCGA GCAAGTTCAT CGGCAAGATC
GCGATCTTCC CGACCCGCTC CTATGTGGCG ATCGCGCGTG AGCAGGCCAA CAAGGCCGTG
GCCAAGCTGG AAGCCGGCAA GATCAAGGGC CGACGTTTCC GCGTGCGGAT GATGTAA
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| Protein sequence | MTDFSTLPLS PALQPGLDAL GYTTLTPVQA QSLPAILDGR DVIAQAPTGS GKTAAFGLGL
LQAIDPSLIR VQALVLCPTR ELADQVGKQI RKLATGIPNL KLLLLVGGVP LGPQLASLEG
HDPHVVVGTP GRVQELARKR ALNLGAVRTL VLDEADRMLD MGFEEPIREI AGRTHKDRQS
LLFSATFPDS IRAMARDLLR EAVEVTVEGA DQAPAIRHMF CEVEPAHRQK ALAGLLLKYT
PESAVVFCNT RKDVDEVANS LQQFGFSALA LHGDMEQRDR EEVLLLLANR SCNVLVASDV
AARGLDVEEL AAVINYELPT DVESYQHRVG RTGRAGASGL AISLVAGREK TRAEAIEAQM
GQPLDWQKTP LATSRPAELP QAAMRTLRID GGKTDKLRPG DILGALTGDA GLSSKFIGKI
AIFPTRSYVA IAREQANKAV AKLEAGKIKG RRFRVRMM
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