| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1620 |
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| Symbol | |
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| ID | 6475490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1822657 |
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| End bp | 1824726 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642730802 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002028008 |
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| Protein GI | 194365398 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.293495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.327553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACG CGAACGACAT CACCATCCGC CTGCTGATCG TCGACGACAG CGGCGAGAAT
GCCGAAGCCA TCGTCAGCAC CCTGCGCAAC AGCGGCATCG CGGTGCGCCC ATGGCGCCCG
CAGGACGCGG CCGAACTGGC GCAGGTGCTG GCCAGCCAGG CCATCGACCT GGTGCTGGCG
TCACCCTCGC AGGGCATTCC ACTGCCGTTG GCCGCACAAC ATATCGCTGC CAGCGGCAAG
GACATTCCGC TGGTGCTGCT GGCCGAGCGC ATCGACGAGG ACGAGCTGGT GCAGGCCAGC
AGCCATGGTA TACGCGCCCT CGCCCTGCGC CAGCGCCCCG AGCATCTGCT TGCGGTGATC
CGTGACCAGT GGGTGGACCT GCAGGCGCGT CGCGGCCTGC GCCGCATCGA GGCTCAGATG
CGCGAGACAG AGCGCCGCTG CGATGCGTTG ATCGCCTCCT CGCGCGATCC CATCGCCTAC
GTGCACGAAG GCATGCACAT CCGCGCCAAC GATGCCTACC TGGAGATGTT CGGCTACGAG
CATTTCGACG ACATCGAAGG CATCTCCCTG CTGGACATGG TCGCCGCCCA GCACGTGGAG
GGCTTCAAGC AGCTGCTGAA GGGCCTGAGC CGTGGCGAGG CGCCGCCGCC GCAGTACCAG
CTCGATGCCC GTCACGAGGA CGGCAGCGCG TTTCCGGCGA CGATGGAATT CACTGCCGCC
ACCTATGAAG GCGAGTCCTG CCTGCAGGTG GTGCTCCGCC GCCGCATGGA GTTCGACCCG
GAACTGGCGC GCGAGGTCGA GGACCTGCGC CAGCGCGACC AGGTCACCGG CCTGCTCAAC
CGCCCGACCT TCATGCTGCA GCTGGAAAGC GCGGTAGCCC AGGCCGGGCG CAGCGAAGGC
CAGTTCGGCC TGCTGCTGAT CGAGCCGGAC CACTATGCGC GCCTGCTGCC GGACATCGGC
TTGGCGTCGG CCGACACCCT GATCGGCGCC CTCGCCGGCC TGCTGGCCGA AGTGGTGGGC
GAGGATGCGC AACTGGCCCG TTTCGGCGAG CACAATTTCG CCGTGCTGCA GGCCGGCCCG
TATGCGCAGA CCGTGGCGCT GGCCGAGCGC ATCCGCGAGG CCTACGCCGC GCATGTGTTC
AGCATCGGCG CCCGCTCGGC CACGGTGACG GTGAGCATCG GCGGCGTGCA GGTGGGCGAG
AAGATCGCCA GCATCGGCCA GGTACTGGCG CGCGCCAGCG AATGCACGCA TGCCGCCGCC
GAGCTGGGCA ACACCTGCCG CATCTTCGAC CCGGCCGCCG CTGACCGCGT GGAGGAAGAA
CGCGTGCTGC GCTGGGTCGC GCGCATCCGT GAAGCACTGG CTGGCGACGG CTTCCAGCTG
CACTACCAGC CGGTACTGAA CCTGCAGGGC GAGTCACTGG AGCTGTACGA GGCGTATCTG
CGCCTGGAGC ATAACGGCGA ACTGCTGAGC CCGACTGCGT TCCTGGGCAT CGCCGAGGAG
CACGGCCTGC TGGCCGACAT CAACCGCTGG GTGGTCTCGC AGGCGATCGC CGTGCTTGGC
CAGCGCGCCC GCGAAGGGCA TGCCACCCAG ATGCTGGTGA AGGTGACCCC GGAATCGTTC
GACGACCCGC AGATGATCGC CACCCTTCGC CGTGAGCTGC AGGCACAGGG TGTGCCTGGC
GAGCGGCTGT GGCTGCATGC GCCGGAAGCG AAGGTGTTCA CCCACCTGCG CAGCGCCCAG
CAGTTCCTTG CCGAAGTGGC ACCGCTGGGT TGCCGGATCG GCCTGGAGCA GTTCGGCTCG
GGGCTGGATT CGTTCCAGCT GCTGGCCCAC TTCCAGCCGC AGTTCCTCAA GCTGGACCGC
GGTTTCACCA GCGATCTGGC GGCCACCCGC GAGAACATCG ATCGCATCAG CCAGATCACC
GCGCGTGCGC AGGAAGCCGG CATCCGCACC ATCGCCGAGT TCGTCAGCGA TGCCAACTCG
ATGACCCTGC TGTTCAGCGC CGGCGTGGAC TATGTGCAGG GCGACTTTGT CGGCCCCGCG
CTGGCGGAAA TGGGCTTCGA GTTCGGGTGA
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| Protein sequence | MQNANDITIR LLIVDDSGEN AEAIVSTLRN SGIAVRPWRP QDAAELAQVL ASQAIDLVLA
SPSQGIPLPL AAQHIAASGK DIPLVLLAER IDEDELVQAS SHGIRALALR QRPEHLLAVI
RDQWVDLQAR RGLRRIEAQM RETERRCDAL IASSRDPIAY VHEGMHIRAN DAYLEMFGYE
HFDDIEGISL LDMVAAQHVE GFKQLLKGLS RGEAPPPQYQ LDARHEDGSA FPATMEFTAA
TYEGESCLQV VLRRRMEFDP ELAREVEDLR QRDQVTGLLN RPTFMLQLES AVAQAGRSEG
QFGLLLIEPD HYARLLPDIG LASADTLIGA LAGLLAEVVG EDAQLARFGE HNFAVLQAGP
YAQTVALAER IREAYAAHVF SIGARSATVT VSIGGVQVGE KIASIGQVLA RASECTHAAA
ELGNTCRIFD PAAADRVEEE RVLRWVARIR EALAGDGFQL HYQPVLNLQG ESLELYEAYL
RLEHNGELLS PTAFLGIAEE HGLLADINRW VVSQAIAVLG QRAREGHATQ MLVKVTPESF
DDPQMIATLR RELQAQGVPG ERLWLHAPEA KVFTHLRSAQ QFLAEVAPLG CRIGLEQFGS
GLDSFQLLAH FQPQFLKLDR GFTSDLAATR ENIDRISQIT ARAQEAGIRT IAEFVSDANS
MTLLFSAGVD YVQGDFVGPA LAEMGFEFG
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