| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1618 |
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| Symbol | secF |
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| ID | 6475488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1819589 |
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| End bp | 1820569 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642730800 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002028006 |
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| Protein GI | 194365396 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00379404 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.63371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGT TTCCGCTGCA CATCCTCCCG AACGACACCA AGATCGACTT CATGCGCTGG
CGCCATGTCG CGATGGTCGT CACGATCATC GTGTTCCTGG CCTCGATCTC CATCATCGGC
TTCAAGGGCT TCAACTACGC CCTGGACTTC ACCGGCGGCA CCCTGATCGA AGCCCGCTTC
GACAAGGCGG TGGACGTCGA GCAGGTCCGT ACCAAGCTCG AAGAGAACGG CTTCGACGGC
GCCCAGGTAC AGAGCGTCGG TGGCAACACC GACCTGCTGA TCCGCCTGGC CCCGCACGGT
GAGCACGCCC CGGGTACCGG CGATGCCGCG CACGAGGACA AGGCCACCGC CGCGGCCGTG
GTGAAGGCGC TGTCCACCGC CGACAACCAG GCTACGGTGC TGCGCAATGA GTTCGTGGGT
CCGCAGATCG GCAAGGACCT GGCGATGAAT GGCCTGTACG CCACCATCTT CATGCTGGCC
GGCTTCCTGA TCTACATCGC CGTGCGCTTC GAATGGAAGT TCGCGGTCAC CGCCAGCATC
GTGGCGATGT TCGACCTGAT CGTGACGGTG GCTTATGTGT CCCTGCTGGG CCGTGAGTTC
GACCTGACCG TGCTGGCCGG CCTGCTGTCG GTGATGGGCT TCGCGATCAA CGACATCATC
GTGGTCTTCG ATCGCGTCCG CGAGAACTTC CGCAGCCTGC GCGTGGACTC GATGGAAGTG
CTGAACCGTT CGATCAACCA GACGCTGTCG CGTACGGTGA TCACCGCGGT GATGTTCTTC
CTGTCGGCGC TTGCCCTGTA CATGTACGGC GGCAGCTCGA TGGAAGGCCT GGCCGAGACG
CACATGATCG GCGCGGTGAT CGTCGTGCTG TCCTCGATCC TGGTGGCGGT GCCGATGCTG
ACGATCGGTT TCCTGCGCGT CAGCAAGCAG GACCTGCTGC CGAAGGCGAA GGACGTCGAG
GCCCTGGCCC GTCGCCCGTA A
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| Protein sequence | MKLFPLHILP NDTKIDFMRW RHVAMVVTII VFLASISIIG FKGFNYALDF TGGTLIEARF
DKAVDVEQVR TKLEENGFDG AQVQSVGGNT DLLIRLAPHG EHAPGTGDAA HEDKATAAAV
VKALSTADNQ ATVLRNEFVG PQIGKDLAMN GLYATIFMLA GFLIYIAVRF EWKFAVTASI
VAMFDLIVTV AYVSLLGREF DLTVLAGLLS VMGFAINDII VVFDRVRENF RSLRVDSMEV
LNRSINQTLS RTVITAVMFF LSALALYMYG GSSMEGLAET HMIGAVIVVL SSILVAVPML
TIGFLRVSKQ DLLPKAKDVE ALARRP
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