Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1616 |
Symbol | yajC |
ID | 6475486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1817311 |
End bp | 1817655 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642730798 |
Product | preprotein translocase subunit YajC |
Protein accession | YP_002028004 |
Protein GI | 194365394 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0558559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.288697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC TTGCCTTCCT GATTCCCGCC GCCCACGCCC AGGCCGCCGG CGGCCAACCG CAGGGCATGG GCCTGACCAC GCTGCTGTTC CCGGTCATCC TGATCGCCAT CATGTACTTC CTGATGATCC GCCCGCAGAT GAAGCGGCAG AAGGAGCACA AGTCCATGCT GGAGAAGATC AAGCGTGGCG ACGAAGTGCT GACCAACGGC GGCATCGCCG GCAAGGTCAC CGACATCGGC GACAACTTCG TCACCATCGA AGTGGCCGAG AACGTGCGCA TCCGCGTGCA GAAGGGCGCT GTTGGCAGCG TGCTGCCGAC CGGCACCCTG GATTCGGCCA AGTAA
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Protein sequence | MNLLAFLIPA AHAQAAGGQP QGMGLTTLLF PVILIAIMYF LMIRPQMKRQ KEHKSMLEKI KRGDEVLTNG GIAGKVTDIG DNFVTIEVAE NVRIRVQKGA VGSVLPTGTL DSAK
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