Gene Smal_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1616 
SymbolyajC 
ID6475486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1817311 
End bp1817655 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content63% 
IMG OID642730798 
Productpreprotein translocase subunit YajC 
Protein accessionYP_002028004 
Protein GI194365394 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0558559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.288697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC TTGCCTTCCT GATTCCCGCC GCCCACGCCC AGGCCGCCGG CGGCCAACCG 
CAGGGCATGG GCCTGACCAC GCTGCTGTTC CCGGTCATCC TGATCGCCAT CATGTACTTC
CTGATGATCC GCCCGCAGAT GAAGCGGCAG AAGGAGCACA AGTCCATGCT GGAGAAGATC
AAGCGTGGCG ACGAAGTGCT GACCAACGGC GGCATCGCCG GCAAGGTCAC CGACATCGGC
GACAACTTCG TCACCATCGA AGTGGCCGAG AACGTGCGCA TCCGCGTGCA GAAGGGCGCT
GTTGGCAGCG TGCTGCCGAC CGGCACCCTG GATTCGGCCA AGTAA
 
Protein sequence
MNLLAFLIPA AHAQAAGGQP QGMGLTTLLF PVILIAIMYF LMIRPQMKRQ KEHKSMLEKI 
KRGDEVLTNG GIAGKVTDIG DNFVTIEVAE NVRIRVQKGA VGSVLPTGTL DSAK