Gene Smal_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1601 
Symbol 
ID6475471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1798886 
End bp1800016 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content66% 
IMG OID642730783 
Productchaperone protein DnaJ 
Protein accessionYP_002027989 
Protein GI194365379 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.095683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC GCGATTACTA CGAAGTGCTG GGCGTTGCCC GCACTGCCAA CGACGAAGAG 
CTGAAGAAGG CCTACCGCCG TTGCGCGATG AAGTTCCACC CGGACCGCAA CCCGGGTGAT
GCGGCGGCCG AAGCCTCCTT CAAGGAGTGC AAGGAAGCCT ACGAAGTGCT GTCCGACGGC
AACAAGCGCC GCATGTACGA CAGCCACGGC CACGCCGCGT TCGAACACGG CATGGGCGGT
GGCGGCGGTC CGGGCGGCCC GGACATGAAC GATATTTTCG GCGACATCTT CGGCAACATC
TTTGGTGGTG CAGGCGGCGG TGGTCCGCGC CAGGCCCGCC GTGGTGCCGA TATCGGTTAC
GTGATGGAGC TGGACCTGGA AGAAGCGGTG CGTGGCGTCG AGCGCCGCAT CGAGATTCCG
ACCCTGGCCG AATGCGGTGA CTGCGATGGC AGCGGCTCGG AAGACGGCAA GGTCGAGACC
TGCAACGTCT GCCATGGTCG CGGCCAGGTG CGCATCCAGC GCGGTATCTT CGCCATGCAG
CAGGCCTGCC ACAACTGCGG CGGCCGCGGT CAGATCATCG CCAAGCCCTG CAAGACCTGC
CATGGCAACG GCCGTGTCGA GGAAGACAAG GTGCTGTCGG TGAAGGTGCC GGCGGGCGTG
GATACCGGCG ACCGCATCCG TTTGTCGGGC GAAGGCGAGG CCGGTCCGGC CGGTACACCG
CCAGGCGATC TGTACGTGGA AGTGCGGGTA CGCGAGCACG CGATCTTCCA GCGCGATGGC
GACGACCTGC ACTGCGAAGT GCCGATCCGC ATCTCGCAGG CCGCGTTGGG CGACACCGTG
CGCGTGGCAA CCCTCGGCGG TGAAGCGGAA ATCCGCATCC CGGCCGAGAC CCAGACCGGC
AAGCTGTTCC GCCTGCGCGG CAAGGGCGTG CGTTCGGTGC GCAGCCGCAG CGAAGGCGAC
CTGTACTGCC GCGTGGTGGT GGAGACCCCG GTCAACCTCA CCAACGACCA GCGCAAGCTG
CTGGAGCAGT TCGAAGCAAC CTTCAACGGT GAAGATGCGC GCAAGCACTC GCCGAAGTCG
GCGACCTTCA TCGATGGCGT GAAGGGCTTC TGGGACCGGA TGACGTCCTG A
 
Protein sequence
MSKRDYYEVL GVARTANDEE LKKAYRRCAM KFHPDRNPGD AAAEASFKEC KEAYEVLSDG 
NKRRMYDSHG HAAFEHGMGG GGGPGGPDMN DIFGDIFGNI FGGAGGGGPR QARRGADIGY
VMELDLEEAV RGVERRIEIP TLAECGDCDG SGSEDGKVET CNVCHGRGQV RIQRGIFAMQ
QACHNCGGRG QIIAKPCKTC HGNGRVEEDK VLSVKVPAGV DTGDRIRLSG EGEAGPAGTP
PGDLYVEVRV REHAIFQRDG DDLHCEVPIR ISQAALGDTV RVATLGGEAE IRIPAETQTG
KLFRLRGKGV RSVRSRSEGD LYCRVVVETP VNLTNDQRKL LEQFEATFNG EDARKHSPKS
ATFIDGVKGF WDRMTS