Gene Smal_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1572 
Symbol 
ID6475441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1769274 
End bp1770128 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content65% 
IMG OID642730754 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_002027960 
Protein GI194365350 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.816455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTGC GTTTCCATCG CCCTGCGCTG TGTGCGCTGC TGGCACTAGC TCTGCCTGCC 
GTCGCCTGGG CTGCCACACC TGCGCCACTG AAAGTGATGT CGTTCAATGT CCGCACCCCG
GCCGATACCG AGCCCGGCAA ACGCTGGCCC GACCGCCGTG ATGCGATGGT CAAGGTCATC
CTCGATGCAC ACCCGGCAGT GATCGGCACC CAGGAGCTGG TGAAGGAACA GGCCGACTAC
CTGTCCGAGC ACCTGCCCGG CTACCGCTGG TTCGGCGAAG GCCGCCGTGG TGGCAGCGGC
GACGAGCACA TGGGCGTGTT CTACGACAGC AAGGTGCTGA CCATCGAGGA GTCAGGCAAC
TTCTGGCTGT CCGATACGCC CGACGTGCCC GGCAGCATCA GCTGGGGCAA CCTGTATCCG
CGCATGGTCA CCTGGGCCGT ATTCCGGCGC CTTGATGATG ACCGTCGTTT CTACTTCATG
GACACCCACC TGCCCTACCG CGACGAAGAT GAGCCGCGCC GGGTCAAGGG TGCCGAACTG
ATCGGCAAAC GCCTGGCATC GCTGCCGGCC GACCTGCCGG TGGTGCTGAC CGGAGACTTC
AACAGCGAGC CCGGCGGGGA TACCTACAAA GCGTTCTCCC GCGTGCTGCA GGACACCCGT
CCCCAGGTGA AGGCGCCGCA GGGCCCACGC CTGACCTTCC ATGACTTCAC CGGCAAGGCC
ACCTCACAGC TGGATTGGGT GCTGGTGCGT GGTTTCCATG CGCGCAGCTT CCTCACCGAT
GACCGGCGCA TCGACGGCGT ACTGCCATCC GATCATTTCC CGCTGGTGGT CGAGCTGGAC
TGGCCAGCGC GCTGA
 
Protein sequence
MLLRFHRPAL CALLALALPA VAWAATPAPL KVMSFNVRTP ADTEPGKRWP DRRDAMVKVI 
LDAHPAVIGT QELVKEQADY LSEHLPGYRW FGEGRRGGSG DEHMGVFYDS KVLTIEESGN
FWLSDTPDVP GSISWGNLYP RMVTWAVFRR LDDDRRFYFM DTHLPYRDED EPRRVKGAEL
IGKRLASLPA DLPVVLTGDF NSEPGGDTYK AFSRVLQDTR PQVKAPQGPR LTFHDFTGKA
TSQLDWVLVR GFHARSFLTD DRRIDGVLPS DHFPLVVELD WPAR