Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1548 |
Symbol | |
ID | 6475417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 1742276 |
End bp | 1744168 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642730730 |
Product | heat shock protein 90 |
Protein accession | YP_002027936 |
Protein GI | 194365326 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00180815 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.134338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGA CCACCCAGAC CGAAACCCTT GGCTTCCAGA CCGAAGTCAA GCAGCTGCTG CAGCTGATGA TCCACTCGCT GTACTCCAAC AAGGAGATCT TCCTGCGCGA GCTGGTCTCC AACGCCGCCG ATGCCGCCGA CAAGCTGCGC TTCGAGGCCC TGACCCAGCC CGCCCTGCTG GAAGGCGACA GCGAACTGCG CGTGCGCGTC AGCTTCGACC CCGCCGCCCA CACCATCACC ATCGAAGACA ACGGCATCGG CATGAGCCGC GCCGAAGCGA TTGCCCACCT GGGCACGATT GCAAAGTCCG GCACCGGCGA CTTCCTGCGC CAGCTGTCCG GCGACCAGAA GAAGGATTCG CAGCTGATCG GCCAGTTCGG CGTCGGCTTC TACAGCGCTT TCATCGTCGC CGACAAAGTG GAAGTCACCT CGCGCCGTGC CGGCCTGGCT GCAGGCGAAG GTGTGCGCTG GACCTCGCGT GGCGAAGGCG ATTTCGACGT CGCCACCGTC GACAAGGCCG AGCGCGGCAC CCAGATCATG CTGCACCTGA AGGATGGCGA GCATGACTTC GCCGACGGTT GGCGCCTGCG CAGCATCCTC AAGAAGTACT CGGACCATAT CGGCCTGCCG ATCCAGATGC CGAAGGAAGA CGCCGAAGAA GGCGCGGCCG TCGAGTGGGA GACCGTCAAC CGCGCCAGCG CGCTGTGGAC CCGTCCGCGT ACTGAAATCA GCGACGCCGA GTACACGGAG TTCTACAAGC ACGTGGCGCA CGACCACAGC GACCCGCTGG CGTGGAGCCA CAACAAGGTC GAAGGCAAGC TCGAGTACAC CTCGCTGCTG TACGTGCCCG GTCGCGCGCC CTTCGACCTG TACCACCGCG ACGCGCCCAA GGGCCTGAAG CTGTATGTGC AGCGCGTGTT CGTGATGGAC CAGGCCGAGC AGTTCCTGCC GCTGTACCTG CGCTTCATCA AGGGCGTGGT TGATTCCAAT GATCTGTCGC TGAACGTTTC GCGCGAGATC CTGCAGTCCG GCCCGGTCAT CGATTCGATG AAGGCCGCGC TGACCAAGCG CTCGCTGGAC ATGCTGGAGA AGCTGGCCAA CGACAAGCCT GAGCAGTACG CCACGTTCTG GAAGGAATTC GGCCAGGTGC TGAAGGAAGG CCCCGCCGAG GACTACAACA ACCGCGAGAA GGTCGCTGGC CTGCTGCGCT TTGCCTCCAC CCGTGGCGAC GGCGATGCAC AGAGCGTGTC GCTGGCCGAC TACATCGGCC GCATGGCCGA AGGCCAGGAC AAGATCTACT ACCTGACCGG CGAGAGCTAC AGCCAGGTAC GCAACAGCCC GCACCTGGAA GTGTTCCGCA AGAAGGGCGT GGAAGTGCTG CTGCTGACCG ACCGCATCGA CGAGTGGCTG ATGGGCTACC TGACCGATTT CGATGGCAAG GGCTTCGTCG ATATCGCGCG TGGTGACCTC GACCTGGGTG CGCTGGAAAG CGAAGCCGAC AAACAGGAGC AGGAAGCGGC AGCCAAGGAC AAGCAGGGCC TGGTCGAGCG CTTGAAGAGC GTGCTGGGCG ATGACGTGGC CGAAGTGCGC GTCTCGCACC GCCTGACCGA TTCGCCGGCG GTGCTGGCCA TCGGCGAGCA GGACCTGGGC CTGCAGATGC GCCAGATCCT GGAAGCCAGC GGGCAAAAGG TGCCGGACAG CAAGCCGGTG CTGGAGATCA ATCCGGGCCA CCCGTTGATC GCGAAGCTGG ATGCGGAAGC CGATGGCGCA CGTTTCGACG ACCTGGGCCG GGTGCTGTTC GACCAGGCCG CGCTGGCCGC CGGCGACAGC CTGAAGGACC CGGGTGCCTA CGTGGCACGC CTGAACAAGC TGCTGCTGGA ATTGTCGGCC TGA
|
Protein sequence | MTETTQTETL GFQTEVKQLL QLMIHSLYSN KEIFLRELVS NAADAADKLR FEALTQPALL EGDSELRVRV SFDPAAHTIT IEDNGIGMSR AEAIAHLGTI AKSGTGDFLR QLSGDQKKDS QLIGQFGVGF YSAFIVADKV EVTSRRAGLA AGEGVRWTSR GEGDFDVATV DKAERGTQIM LHLKDGEHDF ADGWRLRSIL KKYSDHIGLP IQMPKEDAEE GAAVEWETVN RASALWTRPR TEISDAEYTE FYKHVAHDHS DPLAWSHNKV EGKLEYTSLL YVPGRAPFDL YHRDAPKGLK LYVQRVFVMD QAEQFLPLYL RFIKGVVDSN DLSLNVSREI LQSGPVIDSM KAALTKRSLD MLEKLANDKP EQYATFWKEF GQVLKEGPAE DYNNREKVAG LLRFASTRGD GDAQSVSLAD YIGRMAEGQD KIYYLTGESY SQVRNSPHLE VFRKKGVEVL LLTDRIDEWL MGYLTDFDGK GFVDIARGDL DLGALESEAD KQEQEAAAKD KQGLVERLKS VLGDDVAEVR VSHRLTDSPA VLAIGEQDLG LQMRQILEAS GQKVPDSKPV LEINPGHPLI AKLDAEADGA RFDDLGRVLF DQAALAAGDS LKDPGAYVAR LNKLLLELSA
|
| |