| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1542 |
|---|
| Symbol | |
|---|
| ID | 6475411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1737262 |
|---|
| End bp | 1737975 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642730724 |
|---|
| Product | lipoprotein releasing system, ATP-binding protein |
|---|
| Protein accession | YP_002027930 |
|---|
| Protein GI | 194365320 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.523279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.32706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGG TCTTCAACCG CGGCGATGAA GTGATCCGCG CCGAGGCATT GGGCAAAACC
TATGCCGAGG GACGCATGCA GACCCCGGTG TTCGATGGCC TGGGCCTGAC CGTGACCGCA
GGCGAGACGG TGGCGATCAT CGGTGCCTCC GGCGCCGGCA AGAGCACGCT GCTGCACCTG
TTGGGCGGGC TGGATACTCC GACCGCCGGC GAGGTATACG TGACCGGCCA GCGAATGTCG
GCGCTGTCTG ATACCGCGCG TGGCCTGCTG CGCAACCAGG CACTGGGCTT CGTCTACCAG
TTCCATCACC TGCTGCCGGA GTTCACCGCG TTGGAAAACG TAATGATGCC GGTGCTGCTG
GCCGGCACCG CGGTGGCCGA AGCGAGCAGC CGTGCAACGA CCCTGCTGGA AGCGGTCGGC
CTTGGCCATC GTCTGGACCA CAAGCCGGGC GAACTGTCCG GTGGCGAGCG CCAGCGCGCG
GCCGTGGCGC GTGCGCTGGT CAACCATCCG GCCTGCGTGC TCGGCGACGA GCCGACCGGC
AACCTCGATG ACCGCACCGC GGCGACGGTG TTCGAGCTGA TGCTGGAGCT CAACCGGGCG
CGGCATACCA GCCTGGTGCT GGTGACCCAC GACCGCAGCC TGGCGCGGCG CCTGGACCGG
GTGCTGGAGC TGCGCGAAGG GCGCCTGCAC GCACTGGCCC ACGCCGACGT CTGA
|
|---|
| Protein sequence | MNKVFNRGDE VIRAEALGKT YAEGRMQTPV FDGLGLTVTA GETVAIIGAS GAGKSTLLHL
LGGLDTPTAG EVYVTGQRMS ALSDTARGLL RNQALGFVYQ FHHLLPEFTA LENVMMPVLL
AGTAVAEASS RATTLLEAVG LGHRLDHKPG ELSGGERQRA AVARALVNHP ACVLGDEPTG
NLDDRTAATV FELMLELNRA RHTSLVLVTH DRSLARRLDR VLELREGRLH ALAHADV
|
|---|
| |