| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1541 |
|---|
| Symbol | |
|---|
| ID | 6475410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1736028 |
|---|
| End bp | 1737269 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642730723 |
|---|
| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| Protein accession | YP_002027929 |
|---|
| Protein GI | 194365319 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.470748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.399061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAC CCCTTCCCGT GGCGATCGGC CTGCGCTACC TGCGCGCCAA GCGCCGCAAC
GGCTTCATCT CCTTCATCTC GATGGCATCG ATCCTGGGCA TCGCGCTCGG CGTCACCGTG
CTGATCACCA CCCTGGCGGT GATGAGCGGT TTCCAGAAGG AAATCCGCAG TCGCCTGCTG
CAGATGACCG CGCACACCAC CATCAGCCGC GACGGCGAGC CGATGCCGGA CTGGATGCGC
GTGGTCGACG TGGCCCGCAA GGACCCGCGC GTGGCCGGTG CCGCGCCTTA CATCGAGATC
CAGTCGATGA TCAGCGGCCC GCGCGTGCAG GGCGCGATCA TCCAGGGCAT CGACCCGGCG
CTTGAGCCGA AGGTGTCGGT GATCGACAAG AAGGTCACCA AGGGCAGCTA CGACAGCCTC
AAGCCAGGCA GCTTCAACCT GCTGCTGGGC AAGGAACTGG CGATCTGGCT GGGCGTGGAT
GTCGGCGATC AGGTGCTGGT GACCTTCGCC GAAGTGCAGG GCACGCCTGC CGGTGCGGTG
CCACGGATGA AGCGCTTTAC CGTGAGCGGC CTCTTCGAGG CCGGCTACAA CGAGGTCGAC
CGAGGTGTCG GCTTCGCCAA CATGAAGGAC CTGGAGCGCG TGCTGCGTTC CGATGGTGCT
ACCGGCGTGC GGCTGAAACT GCACGACATG GACCGCTCGC TGGAAGTGGG CGTGGACCTG
GCGCAGAACC TCGGTGGTGC GTACCGGGTG AGTGACTGGA CCCAGCAGAA CGCCAACCTC
TACCACTCGC TGCGCATGGA GAAGGTGGTG ATGGGCATCC TGCTGTCGTT GATCATCGCC
ATGGGCGCGT TCAACCTGGT GTCCTCGCAG GTGATGCTGG TCACCGACAA GCAGGCCGAC
ATCGCCATCC TGCGCACGCT AGGCCTGACC CCGGGCGGGG TGATGCAGGT GTTCATGGTG
CAGGGTTCGC TGATCGGCAT CTTCGGCACG CTGGCCGGCT TGATCGGCGG CATCACCCTG
ACCCTCAATC TGGAACGCAT CCTCGGCGCC ATCGAGAGCG TGTTCAACGT CAAGCTGATG
CCGGAGGATG TCTACTACAT CACCGGCCTG CCGACCGACA TGCAGACCGG CGACGTGGTG
GCGATCACCG TGGTCGCGCT GCTGATGAGC TTCCTGGCCA CCCTGTATCC CGCCTGGCGG
GCAGCACGCA CCCAGCCGGC GGAGGCCCTG CGTTATGAAT AA
|
|---|
| Protein sequence | MFKPLPVAIG LRYLRAKRRN GFISFISMAS ILGIALGVTV LITTLAVMSG FQKEIRSRLL
QMTAHTTISR DGEPMPDWMR VVDVARKDPR VAGAAPYIEI QSMISGPRVQ GAIIQGIDPA
LEPKVSVIDK KVTKGSYDSL KPGSFNLLLG KELAIWLGVD VGDQVLVTFA EVQGTPAGAV
PRMKRFTVSG LFEAGYNEVD RGVGFANMKD LERVLRSDGA TGVRLKLHDM DRSLEVGVDL
AQNLGGAYRV SDWTQQNANL YHSLRMEKVV MGILLSLIIA MGAFNLVSSQ VMLVTDKQAD
IAILRTLGLT PGGVMQVFMV QGSLIGIFGT LAGLIGGITL TLNLERILGA IESVFNVKLM
PEDVYYITGL PTDMQTGDVV AITVVALLMS FLATLYPAWR AARTQPAEAL RYE
|
|---|
| |