| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1537 |
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| Symbol | sdhA |
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| ID | 6475406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1732615 |
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| End bp | 1734405 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642730719 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002027925 |
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| Protein GI | 194365315 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTT ACAAGATCAC CGAACACAAG TACGACATGG TCGTGGTGGG CGCCGGCGGC
GCCGGCCTGC GCGCCACGTT CGGCCTGGCC GCCAAGGGCC TGCAGACCGT GTGCCTGACC
AAGGTCTTCC CGACCCGTTC GCACACCGTT GCCGCCCAGG GCGGTATCTC GGCCGCACTC
GCCAACATGG GCGAGGACGA CTGGCGTTAC CACTTCTTCG ACACCATCAA GGGCTCGGAC
TGGCTGGGCG ACCAGGACGC CATCGAGTAC ATGTGCCGTG AGGCCATCCC GGCCATCATC
GAACTCGAAC ACTACGGCGT GCCGTTCTCG CGTACGGCCG AAGGCAAGAT CTACCAGCGT
CCGTTCGGTG GCATGACCAC CAAGTACGGC GAAGGCCCGG CGGCGCAGCG TACCTGCGCG
GCGGCCGACC GTACCGGCCA CGCGATGCTG CACACCCTGT ACCAGCAGTC GCTGAAGCAC
GACGCGCGCT TCATGATCGA GTACTTCGCG CTCGACCTGA TCTTCGATGA CGAAGGTGCC
TGCCGCGGCG TGCTGGCCCT GGACATGTCC GACGGTACCC TGCACCTGTT CCGCGCCCAG
GGCGTGGTGC TGGCCACCGG CGGCTACGGC CGTGCCTACT TCAGCGCCAC CTCGGCGCAC
ACCTGCACCG GCGACGGTGG TGGCCTGGCC ATGCGTGCCG GCATCGCCAT GCAGGACATG
GAGTTCGTGC AGTTCCACCC GACCGGCATC TATGGCGCCG GCTGCCTGAT CACCGAGGGT
GTCCGCGGTG AAGGTGGCAT CCTGCGCAAC AGCAGTGGCG AGCGCTTCAT GGAGCGTTAC
GCACCGCACT ACAAGGATCT GGCCTCGCGC GACGTGGTCA GTCGTTCGAT GACCATCGAG
ATCCGCGAAG GCCGCGGCGT TGGCGAGCAC AAGGACCACA TCCTGCTCGA CCTGACCCAC
CTCGGCCCGG GCGTGATCGA CGAGAAGCTG CCGGGCATCG CCGAGAGCGC CCGCATCTTC
GCCGGCGTCG ACGTGCACAA GCAGCCGATC CCGGTGATCC CGACCGTGCA CTACAACATG
GGCGGCATCC CGACCAATTA CCACGGCGAA GTGGTGCGCA AGGATGGCGA CAACCCCGAT
GCGGTGATCC CTGGCCTGTA CGCGATCGGC GAAGCCGCCT GCGTGTCGGT GCACGGTGCC
AACCGCCTCG GCTCGAACTC GTTGCTGGAT CTGGTGGTGT TCGGTCGTGC GGTGGCCAAC
CGTTGCGCCG AGACCATCAA GCCGGGCGCG TCGCACAAGC CGCTGGCGGC CGATGCCTGC
GACAAGGCAC TGGGCCTGCT GGACAAGCTG CGCCACGCCA ACGGCGACAC CCCGACCTCG
GTCATCCGCG ATCGCATGCA GCGCACCATG CAGGCCGACG CCGCCGTCTT CCGCACCAGC
CAGACGCTGA AGGAAGGCTG CGAGAAGATG GACAAGATCT TCGACTCGTT CCAGGACGTG
AAGGTCTCCG ACCGTTCGCT GGTATGGAAC TCGGACCTGA TCGAGACCTA CGAGCTGAAC
AACCTGCTGC TCAACGCGGT GGCGACGATC AACTCGGCCG AACAGCGCAA GGAAAGCCGC
GGCGCGCATG CGCACGAGGA CTTCCCGGAC CGCGACGACG TCAACTGGCA GAAGCACACC
CTGGTCAGCG TCGACGAGAA GGGCAAGTGC AGCTTCGACT ACCGTCCGGT GCACATGTAC
ACGTTGACCG ACGACGTGTC CGTGGTGCCG CCGAAGCCGC GCGTGTACTG A
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| Protein sequence | MSAYKITEHK YDMVVVGAGG AGLRATFGLA AKGLQTVCLT KVFPTRSHTV AAQGGISAAL
ANMGEDDWRY HFFDTIKGSD WLGDQDAIEY MCREAIPAII ELEHYGVPFS RTAEGKIYQR
PFGGMTTKYG EGPAAQRTCA AADRTGHAML HTLYQQSLKH DARFMIEYFA LDLIFDDEGA
CRGVLALDMS DGTLHLFRAQ GVVLATGGYG RAYFSATSAH TCTGDGGGLA MRAGIAMQDM
EFVQFHPTGI YGAGCLITEG VRGEGGILRN SSGERFMERY APHYKDLASR DVVSRSMTIE
IREGRGVGEH KDHILLDLTH LGPGVIDEKL PGIAESARIF AGVDVHKQPI PVIPTVHYNM
GGIPTNYHGE VVRKDGDNPD AVIPGLYAIG EAACVSVHGA NRLGSNSLLD LVVFGRAVAN
RCAETIKPGA SHKPLAADAC DKALGLLDKL RHANGDTPTS VIRDRMQRTM QADAAVFRTS
QTLKEGCEKM DKIFDSFQDV KVSDRSLVWN SDLIETYELN NLLLNAVATI NSAEQRKESR
GAHAHEDFPD RDDVNWQKHT LVSVDEKGKC SFDYRPVHMY TLTDDVSVVP PKPRVY
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