Gene Smal_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1533 
Symbol 
ID6475402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1730666 
End bp1731541 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content70% 
IMG OID642730715 
Productfolate-binding protein YgfZ 
Protein accessionYP_002027921 
Protein GI194365311 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGACA ACCTGCCCCC TGCTTTCGTC GGATATCCGC GCCTGCCCGG CCACCAGTTG 
CTGAGCCTGC AGGGCCCGGA TGCGGCCGTA TTCGCCCATG CCCAGTTCAG TGGCGATGTC
ACTGCCCTGC CCCTGCTGCA CTGGCAGTGG AGCGCCTGGC TGAGCGCCAA GGGCCGCACC
CTGACGGTGT TCCAGCTGCT TCGGCTGGCC GAAGACCATG TGATGCTGGT GCTGGCCGAC
GGTGATGCCG ATGCGATTGC GTCGCAACTG CAGCGCTTCG TGTTCCGCCG CAAGGTGAAG
GTACTGGTGC GCAGCGATCT GGCCGTGGCC GGTGCGTTCA CTGCGCCCGA GGCCGCCAGC
GGCGCCGCCA TTGCGCAGAC CACAGGTGAC GGCTGGGAGC TGGACCTGGG CAGCGACGCG
CTGCCGCGCA CCCTGCGCAT CGGCGCCACC GAGGCCTTCG CCGCCGGCAG CGAGGCCGAT
GAGGCCACTT TCGCGCTTGC CTGGCGCCAG GCCGACCTGC GCCATGGCCT GCCGCGGCTG
GAAGAAAGCC AGCGCGAAGT GTGGACCCCG CAGCAGCTGG GCCTGGACCG CCTGAATGGC
TACAGCGTGA AGAAAGGCTG CTACCCGGGC CAGGAAATCG TCGCCCGCAC CCACTTCCTC
GGCAAGGCCA AGCGCGCGGT GCAGCTGCTG CATACCGCAG CACCGGCGCA GGCCGGTGAT
GGCGTGCAGC AGGACGGTAC GGCGCTGGGC ACCATTGCCA GCGTGGCCGG CGATCTGGCG
CTGGCGGTGC TGCCGCTGGA GGCCAGCGAC GCTGATCTGC AGGTGGGTGA TGCGGTTGCG
CAGCGGATAC CGCTGCTGGA TGGGCTGGCG CGTTAG
 
Protein sequence
MPDNLPPAFV GYPRLPGHQL LSLQGPDAAV FAHAQFSGDV TALPLLHWQW SAWLSAKGRT 
LTVFQLLRLA EDHVMLVLAD GDADAIASQL QRFVFRRKVK VLVRSDLAVA GAFTAPEAAS
GAAIAQTTGD GWELDLGSDA LPRTLRIGAT EAFAAGSEAD EATFALAWRQ ADLRHGLPRL
EESQREVWTP QQLGLDRLNG YSVKKGCYPG QEIVARTHFL GKAKRAVQLL HTAAPAQAGD
GVQQDGTALG TIASVAGDLA LAVLPLEASD ADLQVGDAVA QRIPLLDGLA R