Gene Smal_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1523 
Symbol 
ID6475392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1718576 
End bp1719802 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content69% 
IMG OID642730705 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002027911 
Protein GI194365301 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTC CCGACGCCCC GTTTCTCCGA ACCCTGTGCA GCCTGCGCTG GCTTGCCGTA 
GGCGGCCAGG CCGCCACCAT CCTGGTCGCC ACCTGGGTGC TGGGACTGCC GTTGCCGCAG
CTGCCGCTGT GGGCCGGCGT GGCCGTACTG ACCCTGTTCA ACATCTACAC CCAGCTGCGC
CCGGAAGCGG CTGACACAGC ACCGCTGACC GCATTCGGTC ACATCCTGGT GGACGTGATC
ATCCTGACCT GGATGGTGGG CTGGAGCGGC GGCATGGCCA ACCCGTTCAG CTCGCTGTTC
CTGATCCTGA TCGCGCTGGC CGCGTTCGCC CTGCCCCTGC GCTGGGCGCT GGCGGTGGCA
CTGGCCTGCC TGCTCGGCTA CGCCGCCAGC GGCATTTTCG GGCAGCCGTT GCCGGACGGT
TATTTCCGCG CGCAGGACCT CAACCGCTGG GGCGTGGTCG CCAATTTCCT GATTTCCGCT
GCGGTCGTGC TGACCTTCTC CACCCGCCTG GCGTTGGCGC TGCGCCAGCG TGAGCTTGAA
CTGTCGGCAC TGCGCGAGCG CTTCGCCCGC AACGAGGGCA TTGTCGCCCT GGCCACCCAT
GCGGCCTCGG TGGCGCACGA ACTGAACACG CCGCTGGCGA CCATGACCCT GCTCGCCGAT
GACGTCGCCG AGCGCAGCGA AGAGCCGGAA GTACGCGAAG ACATGGAAAC CCTGCGCGAG
CTGCTGGTGC AATGCCGTGA ACGGGTGCTG GCGCTGGCCG CGCCGGCCTC GGCTGATGCA
CCGGGACGCA GCCATTCCAG CGCCCAGCAG GTGCTGGAGC AGTGGCGTTT GGTGCGTCCG
ACCATCGACC TGCACCGCAA CGACGATGCG CCGTTGCGGC TGCCGCTGGA TCCGGGCGTG
GGCCATCTGC TGATGGTCCT GCTCAACAAT GCCGCCGATG CCGGCGAACA GGCCGGCCGG
CCGCGCGTGG ACCTGGACCT GCGCATCGAA GGCGACGACC TGATCGGCGA AGTCCGCGAC
TACGGCCATG GCTTCGACGC CCGTGCCGCC GTCCTGCCGG GCAAGCTGTT CGGCAGCAGC
AAGAGCGAGG GCATGGGCGT CGGCCTGGCC CTGTCCCATG CCACCATCGA ACGCCTCGAC
GGCGAGATGT GGATGCGCCC GGCCCAGGGG GCCGGCAGCC GCGTCGGCTT CCGCCTGCCG
CTGGCCCCAC GCGAGGACAC CCCATGA
 
Protein sequence
MTGPDAPFLR TLCSLRWLAV GGQAATILVA TWVLGLPLPQ LPLWAGVAVL TLFNIYTQLR 
PEAADTAPLT AFGHILVDVI ILTWMVGWSG GMANPFSSLF LILIALAAFA LPLRWALAVA
LACLLGYAAS GIFGQPLPDG YFRAQDLNRW GVVANFLISA AVVLTFSTRL ALALRQRELE
LSALRERFAR NEGIVALATH AASVAHELNT PLATMTLLAD DVAERSEEPE VREDMETLRE
LLVQCRERVL ALAAPASADA PGRSHSSAQQ VLEQWRLVRP TIDLHRNDDA PLRLPLDPGV
GHLLMVLLNN AADAGEQAGR PRVDLDLRIE GDDLIGEVRD YGHGFDARAA VLPGKLFGSS
KSEGMGVGLA LSHATIERLD GEMWMRPAQG AGSRVGFRLP LAPREDTP