Gene Smal_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1517 
SymbolpanB 
ID6475386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1713701 
End bp1714516 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID642730699 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_002027905 
Protein GI194365295 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.108328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC ACGCAGACAG CAAGCCCTGG ACCGTTCCCG CACTGGCCGA GGCCAAGCGC 
AATGGCCAGA AGCTGGTCAT GTTGACCGCC TACGACGCCG GCTTCGCCCG CACTTTCGAT
GCCAACGGTG TCGACCTGAT CCTGATCGGC GATTCGCTGG GCATGGTCGT GCAGGGTCAT
GACTCCACCT TGCCGGTGAC CGTGGCCGAC ATGGTCTACC ACACCCGCGC CGTGGCCCGC
GTGCTGCAGC GCGCGCTGCT GGTGGCCGAC CTGCCGTTCG GCGCCGATGC CACCCCGGAG
CGCGCGCTGG ATGCCTCGCT GCAGCTGCTG CAGGCCGGCG CGGAGATGGT CAAGATCGAA
GGTGCCGGCT TCAAGGTCGA CATCATCCGC TACCTGGTCG AACGCGAGAT TCCGGTCTGC
GCGCATCTGG GCCTGACCCC GCAGTCGGTG CTGCGCCTGG GCGGCTTCAA GATCCAGGGC
CGTGGCGATG CTGCGCGCCA GCTGGTGGAA GATGCCAGGG CCGTGGCTGC TGCCGGCGCC
AGCATCATGG TGCTCGAATG CGTGCCGACT CCGGTCGCCG CCGAAGTCAC CGCTGCGGTG
GACGTGCCGA CCATCGGCAT CGGTGCCGGC CCGCAGTGCG ATGGCCAGGT ACTGGTGCTG
CACGATTTCC TCGGCCTGGA CAGCGGCCAT CGCCGTCCGA AGTTCGTCAA GGACTTCCTC
GCCGAAGGCG GTTCGGTGGC CGGTGCCACC CGCGCCTATG CCGACGCCGT GCGCGACGGC
AGCTTCCCCG ACGAACAGCA CGCCTACGCC CAATGA
 
Protein sequence
MSTHADSKPW TVPALAEAKR NGQKLVMLTA YDAGFARTFD ANGVDLILIG DSLGMVVQGH 
DSTLPVTVAD MVYHTRAVAR VLQRALLVAD LPFGADATPE RALDASLQLL QAGAEMVKIE
GAGFKVDIIR YLVEREIPVC AHLGLTPQSV LRLGGFKIQG RGDAARQLVE DARAVAAAGA
SIMVLECVPT PVAAEVTAAV DVPTIGIGAG PQCDGQVLVL HDFLGLDSGH RRPKFVKDFL
AEGGSVAGAT RAYADAVRDG SFPDEQHAYA Q