Gene Smal_1511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1511 
Symbol 
ID6475379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1707601 
End bp1708494 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content70% 
IMG OID642730692 
Productdihydrodipicolinate synthase 
Protein accessionYP_002027899 
Protein GI194365289 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.140382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCTTT CCGGCCTCAT CACCGCGCTG GCGACCCCGT TCCGGGCCGA CGGCGCCCTC 
GACCCCGACG GTTGGCAGCG CCTGCTGCAT CTGCAACTGG AAGGTGGTGT CCATGGCGTT
GTCGTTGCCG GCTCGACCGG TGAAGCGGCA ACCCTCACCG ATGCCGAGTA CGACCAGCTG
CTGGCCAGCG CGGTCGAGCG CATCGGCGGC CGCATCCCGG TCATGGCCGG TACCGGCCTG
TCGGGTACCG CCAAAACCAT CGAACAGACC CGCCGCGCCG CCGCGCTCGG TGCCAGCCAC
GCGCTGGTGG TCACCCCGCC GTATGTACGG CCGACCCAGG CCGGCCTGAT CGCGCACTAC
CGCGCCGTCG CCGACCAGGG CGGGCTGCCG GTCGTGCTGT ACAACGTGCC CGGACGTACC
GGTTGCGACA TGCAGCCGGA GACCGTGGCC GAGCTGGCCA GCCATCCCAA CATCGTCGGC
ATCAAGGAAG CCGTGGGTGA CACCGGCCGG GTGCAGGCGC TGCTGGCGTT GCGCAGCGCG
CAGTTCGCCG TGCTCAGCGG CGATGACGGT ACCGCTGCGC GTTCGATCCG GGCTGGCATC
GATGGCCTGA TCTCGGTCGG TTCCAACGTG CTGCCGGGCG CCTATCGCCG GATGTGCGAG
CTGGCGGCCG CCCACGACCA CGAAGCCACC GAATCATGGG ATGGGCGCCT GCAGCCGTTC
CATGAGTTCT GTGGCGTCGA ACCGAACCCG ATTCCGGTCA AGGCGCTGCT GCGCCGCATC
GGCATCGGCC ACGACCTGCG CCTGCCGCTG CTGCCGTTGT CGGCAGTGCA TCATCCGGCT
GCCGATCACC TTGCCGGCGA CATCGCCGCC CTCGAAGCCC TTTCCAGCCA CTGA
 
Protein sequence
MSLSGLITAL ATPFRADGAL DPDGWQRLLH LQLEGGVHGV VVAGSTGEAA TLTDAEYDQL 
LASAVERIGG RIPVMAGTGL SGTAKTIEQT RRAAALGASH ALVVTPPYVR PTQAGLIAHY
RAVADQGGLP VVLYNVPGRT GCDMQPETVA ELASHPNIVG IKEAVGDTGR VQALLALRSA
QFAVLSGDDG TAARSIRAGI DGLISVGSNV LPGAYRRMCE LAAAHDHEAT ESWDGRLQPF
HEFCGVEPNP IPVKALLRRI GIGHDLRLPL LPLSAVHHPA ADHLAGDIAA LEALSSH