Gene Smal_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1499 
Symbol 
ID6475364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1694552 
End bp1695691 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content70% 
IMG OID642730677 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002027887 
Protein GI194365277 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.276684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCT CATCCCCACG TGCCCAGCAG CACGCCACCC GTGCCGCCTT CTTCATTCCC 
GGATTCGCCA CCGCCGCCTG GGCGCCGATG GTGCCCTATG CAAAAGCCAA GGCCGGGTTG
TCCGATGCCA GCCTCGGCGC GGTACTGCTG TGCCTCGGCC TGGGCTCGTT GCTGGCGATG
CCGTTGGCCG GTGCCTTGAC CGGCCGCCTC GGTTGCCGGC GGCTGCTGAT GGTGACCTGC
GCGATGGTGC TGCTGGCATT GCCACTGCTG GCGCTTGCGC CCTCGCCTTT CGCGCTGGGC
GCTGCTCTGT TCGTATTCGG TGCCGGCGTG GGCGCGATGG ACTGCACGGT GAACATGCAG
GCGGTGGCGG TCGAACGCGA CGCCGGGCGC GCGATGATGT CCGGCTTCCA CGCCTTCTAC
AGCATCGGTG GTTTTATCGG TGCCGGCTGC ATGACCGGCC TGCTGATCCT GGGTACGCCG
CTGTGGCTGG CCGCGCTGGT TTCGGTGGCG GCACTGCTGC TGGTCGCGGC GCTGTCGGCG
CCTCACTGGC GCCCACAGCG GATCCTGCAC GAAGGGCCGC TGCTGGCACT GCCACATGGC
GTGGTGCTGT TCATCGGCGT GCTGGCCTTC GTGGTGTTCC TCGGCGAAGG TTCGATGCTG
GACTGGAGTG CCGTGTTCCT GGCCGAAGTA CGGCAGGTGC CACGCGACCA GGCTGGCGCC
GGCTTCGCGC TGTTCACCCT GGCGATGACC GCGATGCGCC TGTTCGGCGA CGGTATCGTC
GAGCGCCTGG GCCGCACCCG CACCATGGTC TTCGGCGGCA TCACCGCTGC GGCCGGTTTC
ACCCTGGCCA CGCTGGTGCC GTCATTCCCG GTGGCGCTGG CCGGCTACGT GCTGGTCGGG
CTGGGCTGCG CCAACATCGT GCCAGCGCTG TTTTCCATGG CGGGCCAGCA GCGGGTGATG
CCGGAGAGCA TCGCCATCAC TGCGGTTACC ACGCTGGGGT ACGCCGGCAT CCTCGCCGGC
CCGGCAGCGA TCGGTGCACT GGCACACGCC ACCAGCCTCG GCTTCGCCTT CCTCTGCGTG
GCCGCGCTGC TGCTGGGCGT AGCCGCGTCG GCGCGCTCAC TGGCACGGCG CCTGCCCTGA
 
Protein sequence
MTPSSPRAQQ HATRAAFFIP GFATAAWAPM VPYAKAKAGL SDASLGAVLL CLGLGSLLAM 
PLAGALTGRL GCRRLLMVTC AMVLLALPLL ALAPSPFALG AALFVFGAGV GAMDCTVNMQ
AVAVERDAGR AMMSGFHAFY SIGGFIGAGC MTGLLILGTP LWLAALVSVA ALLLVAALSA
PHWRPQRILH EGPLLALPHG VVLFIGVLAF VVFLGEGSML DWSAVFLAEV RQVPRDQAGA
GFALFTLAMT AMRLFGDGIV ERLGRTRTMV FGGITAAAGF TLATLVPSFP VALAGYVLVG
LGCANIVPAL FSMAGQQRVM PESIAITAVT TLGYAGILAG PAAIGALAHA TSLGFAFLCV
AALLLGVAAS ARSLARRLP