| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1498 |
|---|
| Symbol | |
|---|
| ID | 6475363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1693352 |
|---|
| End bp | 1694470 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642730676 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_002027886 |
|---|
| Protein GI | 194365276 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.219289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCC TGCTGCTGTT GCTGCTGGCG TGCGCCGGCC TGTGGCTGGC TGCATGCTCA
TCCTCGATCA ATGCCTCGTC CACCTCGCTT GCCGATCGGC TGATCGCGCC GGGTGGCGTG
TCGACCCTGC TTGATCGCCC GCGCATAGCC GCGGCCATCG CCGAACTGCC GAACCGCCAT
GGCTTCGCGC CGGGGCGCGA TGGCGTGCCG ATCTTCTGGC GCGTGTTCGA TCCGGGCAAC
TATGGTGCGC GCTATCACTA CCTGCCGCAG CGCCACGAGA ATGGCCTGCC GCTGGATACC
GGCTTGAGCC TGGCCGTGCC ACAGCCCTTC CACGCGCAGG CACCGCGCGG CACCGTGGTG
CTGCTGCACG GCTGGATGAT GAATGGTGAT TCGATGCTGC CGTGGTCGCT GCAGCTGGCG
GAGTCCGGCT ACCGCGTGGT CACCCTCGAC CTGCGCAACC ACGGCCAGTC CGGTGCCGGT
CCGTCCGGCT ATGGCACCTA TGAATCGGAT GACGTGGTCG ATGTAATCAG CGAGCTGCGT
GCACGTGGTG AAGTGACCGG CCCGCTGTAC CTGTTCGGCG TGTCCTATGG CGCCGCCACA
GCGGTATTCA CCGCCGACAA GCTCGGCGAC CAGGTGGAAG GCGTGGTAGC GATGGAGTCG
TTCGCCAATG CCGGCGTGGC CATCCGCACG ATGATCCCGC ACCTGATGGG ACTGCAGCCG
GAAGGGTTGA AGGCGCAGGC GGTAGCCTCC TACGCGCGCT GGCGTTACGG TGGCCAGGAC
ATCGACCAGG TGGTCGCCGC GGCAAGCCGC CGCATCGACG TCGATCTCGA CCGTGTGGAT
GTGGCGCGCG CGCTGGCCGA TACCCGCGCC TGCGTACTGC TGCTGCACGG GCAGGGCGAC
CAGCACATCC CGGTCAGCCA GGGCCGCGAA CTGGCGCAGG CCAATCCGCG CGCGCACTAC
ATCGAGATGC GCGGCGAGGA CCACATCACC CTGCCGTTGC GGCTGGACCT GCTGGCCGGT
GTGGTCGACG ACTGGATGGC GCGCGACGAG CACCATCCGC AGAGTGCCTG CCCGGCTCCC
CAGCTGCCGG CCCAGGCCGA GTGGCTGACG CGCAGCTGA
|
|---|
| Protein sequence | MKRLLLLLLA CAGLWLAACS SSINASSTSL ADRLIAPGGV STLLDRPRIA AAIAELPNRH
GFAPGRDGVP IFWRVFDPGN YGARYHYLPQ RHENGLPLDT GLSLAVPQPF HAQAPRGTVV
LLHGWMMNGD SMLPWSLQLA ESGYRVVTLD LRNHGQSGAG PSGYGTYESD DVVDVISELR
ARGEVTGPLY LFGVSYGAAT AVFTADKLGD QVEGVVAMES FANAGVAIRT MIPHLMGLQP
EGLKAQAVAS YARWRYGGQD IDQVVAAASR RIDVDLDRVD VARALADTRA CVLLLHGQGD
QHIPVSQGRE LAQANPRAHY IEMRGEDHIT LPLRLDLLAG VVDDWMARDE HHPQSACPAP
QLPAQAEWLT RS
|
|---|
| |