| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1494 |
|---|
| Symbol | |
|---|
| ID | 6475359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1686283 |
|---|
| End bp | 1688391 |
|---|
| Gene Length | 2109 bp |
|---|
| Protein Length | 702 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642730672 |
|---|
| Product | phospholipase C, phosphocholine-specific |
|---|
| Protein accession | YP_002027882 |
|---|
| Protein GI | 194365272 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGATA TCGGCCGACG CCGGTTGTTG CAGGCCGGCG CTGCCGCCGG CCTTTCCCCG
CTGCTGCCCA GCATCGCCCG GGCCGCAGCG ATCGCCCCCG CCGCGCAGAC GCGCAGCCTC
GAAGACCTGC AGCACATCGT GGTGTTCATG CAGGAGAACC GTTCGTTCGA CCACTACTTC
GGCACGCTGC CGGGGGTACG TGGCTTCGGC GACCGCTTCG TGGCCCCGGC CGCTGCGCTG
CAGGCCGGTG GCCGCGCGCG CAGCCTGTGG CTGCAGCCCG ATGCCAGCGG CCAGCGCGCG
ATCGCACCGT TCCCGCTGGA TACCGCTGCG CACTTCGGCT ACATGCGGGT GGAAGGCACG
CCGCATACCT GGCCCGATGC ACAGCGCGCC TGGGACCATG GACGCATGGG GCAATGGCCG
AAATCCAAGC AGAACCACTC GATGGGCTAC TTCCAGCGCA GCGACCTGCC CTTCCAGTTT
GCCCTGGCCG ATGCCTTCAC GATCTGCGAC GCCTACCACT GCGCGATGCA GGCCGGGACC
AACCCGAACC GGGTGTTCCT GTGGACGGGC CACAACGATG CGGCCGCGCG CGCCGGTGGC
CCGGTGATCG CCAACTCGCA CGACAACTTC CCGGAACATG GCGGGCATCC GGCGTCGTAC
CGATGGAGCA GCTATGTCGA ACGCCTGCAG AAGGCCGGGG TGTCCTGGCA GATCTACCAG
GACATGGCTG ACAACTTCAC CGACAACCCA CTGGCCGGCT TCGAGTCTTT CCGCCAGGCC
TACCGTGCTG CGCCGGGGCA TGACCCGCAG CTGCGCGCGC GTGGGGTCAG CACGCGTGGG
CTGGCACAAC TGCGCCAGGA CGTGGTCGAT GGGCGCCTGC CGCAGGTCAG CTTCATCATC
GCCGACGCGG CCGGCAGCGA GCATCCCGGC CCTTCCAGCC CGGCCCACGG CGCGGCCTAT
ACCGCTCGCG TGCTGGATGC ACTGACCGCC GATCCGGAGG TCTGGAGCCG CACCGCCCTG
CTGCTGATGT TCGACGAGAA CGACGGCTTC TTCGACCACA TGCCGCCACC GGCACCACCT
TCACCGGAAA ACGGTGGCTG GGCGGGTGCG TCTTCGGTCA GCACCGAGGG CGAGTACCAC
CGCCATCCGG CACCGGGGGA TGAGAAGTAC GACGCCGCCG AGCTACGCGG ACGCCCCTAC
GGACTGGGCC CGCGCGTGCC GCTGTACGTG ATCTCGCCCT GGAGCCGGGG TGGCTGGGTC
GATTCGCAGG TGTACGACCA CACCTCGGTC ATACGCCTGA TCGAACACCG CTTCGGCGTG
GCCGCACCGG ACATCTCGCC GTGGCGCCGC GCGGTCTGCG GTGACCTCAG CAATGCCTTC
GACTTCGCCC AGCGTGATAC CCGCCCGTTC GTACGCGGCC TTCCCGACGT GAGCGCCGTT
GCCGCACGTG CTGCCGCCCT GCCGGGACGC ACCGTGCCGG CATTGCCGGA GGGACTGAAG
CCGGCGAAAC AGGAAAGCGG CGTACGCCCG GCGCGTGCCC TGCCCTACCG GCCGCAGGCA
TCGATTGCTG CGATCGGCGC ATCGGGCGTG GATCTGACGC TGTCCTGCGA TGGTGCAGCG
GCGGTGCTGC ATGTCTACGA CCGGCTGCGG CTGGGAGCGG TACCACGCCG CTACACGCTG
GTACCGGGCA CGCCGCTGCG CGAACGCTGG GCGCTGGACG CCCATGGCCG CTATGACCTG
TGGCTGCTGG GCCCGAACGG CTTCCACCGT CACTTCCAGG GCGCTGCCAA CGGGCCCGTC
GTGCAGGCGT CGGTCGAGCG CGCCGACGGC CAGCTGCGGC TGCGCCTGCG CAATCTCAGC
GATGCCGCAC AGCAGCTGCG CGTGCATGCA GGCGCCTATG CCGGGCACAT GCCGGAACAG
ACGCTGGCGC TGCCGGCGCA TGCAGAGACC GCGTTGGCGT GGGACGCGAC ACCCACTGCA
GGCTGGTATG ACCTGCAGGT CGGCGCGGGT GAGAGCATGC TGCGTCTGGC CGGGCGCGCA
GAGGATGGTC GCCCCGGCAC CAGCGACCCG GCGATGGGCA GCGAGCCATT GCGGTTCGAG
CACGATTGA
|
|---|
| Protein sequence | MTDIGRRRLL QAGAAAGLSP LLPSIARAAA IAPAAQTRSL EDLQHIVVFM QENRSFDHYF
GTLPGVRGFG DRFVAPAAAL QAGGRARSLW LQPDASGQRA IAPFPLDTAA HFGYMRVEGT
PHTWPDAQRA WDHGRMGQWP KSKQNHSMGY FQRSDLPFQF ALADAFTICD AYHCAMQAGT
NPNRVFLWTG HNDAAARAGG PVIANSHDNF PEHGGHPASY RWSSYVERLQ KAGVSWQIYQ
DMADNFTDNP LAGFESFRQA YRAAPGHDPQ LRARGVSTRG LAQLRQDVVD GRLPQVSFII
ADAAGSEHPG PSSPAHGAAY TARVLDALTA DPEVWSRTAL LLMFDENDGF FDHMPPPAPP
SPENGGWAGA SSVSTEGEYH RHPAPGDEKY DAAELRGRPY GLGPRVPLYV ISPWSRGGWV
DSQVYDHTSV IRLIEHRFGV AAPDISPWRR AVCGDLSNAF DFAQRDTRPF VRGLPDVSAV
AARAAALPGR TVPALPEGLK PAKQESGVRP ARALPYRPQA SIAAIGASGV DLTLSCDGAA
AVLHVYDRLR LGAVPRRYTL VPGTPLRERW ALDAHGRYDL WLLGPNGFHR HFQGAANGPV
VQASVERADG QLRLRLRNLS DAAQQLRVHA GAYAGHMPEQ TLALPAHAET ALAWDATPTA
GWYDLQVGAG ESMLRLAGRA EDGRPGTSDP AMGSEPLRFE HD
|
|---|
| |