| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1478 |
|---|
| Symbol | alaS |
|---|
| ID | 6475342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1660817 |
|---|
| End bp | 1663465 |
|---|
| Gene Length | 2649 bp |
|---|
| Protein Length | 882 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642730655 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_002027866 |
|---|
| Protein GI | 194365256 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.734898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.362746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAT CCGCCAAATT CACGACTTCC CAGATCCGCA GCGACTTCCT TGAATTCTTC
AAGGGCAAAG GCCACACCAT CGTGCCGTCG GCGCCGCTGG TGCCGGGCAA TGATCCGACC
CTGCTGTTCA CCAATTCCGG CATGGTGCAG TTCAAGGACG TGTTCCTTGG CGCGGAGAAG
CGCAGCTACG TGCGCGCGGC CGACGTCCAG CGCTGCCTGC GCGCCGGCGG CAAGCACAAC
GACCTTGACC AGGTCGGCTA CACCGCACGT CACCATACTT TCTTCGAAAT GCTGGGCAAC
TGGTCCTTTG GCGACTACTT CAAGAAGGAC GCGATCGCCT GGGCATGGGA GCTGCTGACC
CAGGTCTGGA AACTGCCGGC CGAACGCCTG CTGGTCACCG TCTACCAGAC CGACGACGAA
GCGTATGCGC TGTGGCGCGA CATGGTCGGC ATCCCGGAAG AGCGCATCGT GCGCATCGGT
GACAACAAGG GTGCGCCGTT TGCCTCGGAC AATTTCTGGC AGATGGCCGA TACCGGCCCG
TGCGGCCCGT GCACCGAGAT CTTCTACGAC CACGGCGACC ACATCGCCGG TGGCCCCCCG
GGTTCCCCGG ATGAAGACGG CGACCGCTTC ATCGAAATCT GGAACCTGGT GTTCATGCAG
TTCGATCGCC AGCCCGACGG CACCCTGGTG CCGCTGCCGG CACCGTGCGT GGATACCGGC
ATGGGCCTGG AGCGCCTGGC GGCGATCCTG CAGCACGTGC ACACCAATTA CGAGATCGAC
CTGTTCCAGG CGCTGATCCG CAAGGCGTCC GAACTGACCG GCACCGCCGA TCTGGAGAAC
AAGTCGCTGC GGGTGATCGC CGATCACATC CGTGCCTGCT CGTTCCTGAT CGTCGACGGC
GTGCTGCCGT CCAACGAAGG CCGCGGCTAC GTGCTGCGCC GTATCATCCG CCGCGCCCTG
CGCCACGGCT GGATGCTGGG TGTGCGCCAG CCGTTCTTCA GCAAGCTGGT GCCGACCCTG
GTCGAGCAGA TGGGCGAGGC CTATCCGGAA CTGCCCGCGG CGGCCGATAC CGTCACCCGT
GCGCTGCAGG CCGAGGAAGA GCGTTTCGCT GAAACCCTCG ACGCCGGCAT GAAGATCTTC
GAAGACGTTG CCGGCAAGGC CAGCAATGGC GTGATCCCCG GCGTTGACGC GTTCCGCCTG
TACGACACCT ATGGCTTCCC GCTCGACCTG ACCCAGGACA TCGCCCGCGA GCGCGACCTG
ACCGTCGACA TCGCTGGCTT CGATGCGGCG ATGGAGCAGC AGCGCGAAAC CGCGCGCGCG
GCAGGCAAGT TCGGCGGTGG CGTGACCCTG CCGGCCGAGC TGGTGGCGAC CCTCAGCCCG
ACCCGCTTCC TCGGCTACGA CCGCCTGCAG GCCGACGGCC TGACCGTGCT GGCCGTGCTC
AAGGACGGCC GTCCGGTGCA GTCGGCCAAT GCCGGCGATG CGGTCATCGT GATTACCAAC
CAGACCCCGT TCTACGCCGA GTCCGGCGGC CAGGTCGGCG ACACCGGCGT GCTGACCGGC
AACGGCGTGC GCCTGGCGGT GGAAGACACC CAGAAGTTCG CAGGTCAGTT CCATGGCCAC
GTCGGCATCC TGTCCGAAGG CGGCCTGAAG GTTGGTGACG TGCTGTCCGG CCAGGTCGAT
GGCGAGCGCC GTGGCGCCAC CATCCTCAAC CACTCCGCCA CCCACCTGCT GCATGCCGCC
CTGCGCGAAG TGCTGGGTAC CCACGTGCAG CAGAAGGGCT CGATGGTGGC GCCGGATCGC
CTGCGCTTCG ACTTCTCGCA CTTCCAGCCG ATCAGCGCGG AAGAGCTGGC CGTGATCGAG
CGCAAGGTCA ACCAGCAGGT GCGTGCCAAC AACGCTGCCG AAGTGCACAA CATGGGCATG
CAGGAAGCGC TGGACTTCGG CGCGATGGCC CTGTTCGGCG AGAAGTACGG TGAGCACGTG
CGCGTGCTGA AGATGGGTGA CTACTCCACC GAGCTGTGCG GCGGTACCCA CGTCAACCGT
ACCGGCGACA TCGGCCTGTT CAAGATCACC TCCGAGGGCG GCGTCTCCGC TGGCGTGCGC
CGCATCGAGG CCGTCACCGG CCAGGGTGCC CTGGACTACG TGGATGCCGA AGAGGCCCGC
TTGGCCGAGG CCGCCGACCT GCTCGGCGGC AGCGCTGCCG ACGTGGTCGA GAAGATCCGC
GCCCTTGGCC AGCGCCAGAA GCAGCTGGAA CGCGAGCTGG AGTCCGTGAA GGCCAAGGTT
GCCGCTGGCG CCACCGCCGA CCTGTCCGGC CAGGCCGTCG AGGTTGCCGG TGTGAAGGTG
CTGGCGGCGC GCCTGGAAGG CTTCGACGCC AAGGCCCTGC GTGACGCCAT GGACCGCCTG
AAGCAGCAGC TGGGCGACGC GGTGATCGTG CTGGCCGGTG CCCAGGACGG CAAGGCCGCC
CTGGTCGCGG GTGTGAACGG CAGCGCAATG GGCAAGGTCA AGGCCGGGGA ACTGTTGTCC
CATATCGCCG GTCAGATCGG GGGCAAGGGC GGCGGACGCC CGGACCTCGC CCAGGGTGGT
GGCGAGGACG GGCCCGCCCT TGCCACCGCG CTGGCTGCCG TCGTCGAATG GGTCAGCCCC
CGCCTGTGA
|
|---|
| Protein sequence | MNASAKFTTS QIRSDFLEFF KGKGHTIVPS APLVPGNDPT LLFTNSGMVQ FKDVFLGAEK
RSYVRAADVQ RCLRAGGKHN DLDQVGYTAR HHTFFEMLGN WSFGDYFKKD AIAWAWELLT
QVWKLPAERL LVTVYQTDDE AYALWRDMVG IPEERIVRIG DNKGAPFASD NFWQMADTGP
CGPCTEIFYD HGDHIAGGPP GSPDEDGDRF IEIWNLVFMQ FDRQPDGTLV PLPAPCVDTG
MGLERLAAIL QHVHTNYEID LFQALIRKAS ELTGTADLEN KSLRVIADHI RACSFLIVDG
VLPSNEGRGY VLRRIIRRAL RHGWMLGVRQ PFFSKLVPTL VEQMGEAYPE LPAAADTVTR
ALQAEEERFA ETLDAGMKIF EDVAGKASNG VIPGVDAFRL YDTYGFPLDL TQDIARERDL
TVDIAGFDAA MEQQRETARA AGKFGGGVTL PAELVATLSP TRFLGYDRLQ ADGLTVLAVL
KDGRPVQSAN AGDAVIVITN QTPFYAESGG QVGDTGVLTG NGVRLAVEDT QKFAGQFHGH
VGILSEGGLK VGDVLSGQVD GERRGATILN HSATHLLHAA LREVLGTHVQ QKGSMVAPDR
LRFDFSHFQP ISAEELAVIE RKVNQQVRAN NAAEVHNMGM QEALDFGAMA LFGEKYGEHV
RVLKMGDYST ELCGGTHVNR TGDIGLFKIT SEGGVSAGVR RIEAVTGQGA LDYVDAEEAR
LAEAADLLGG SAADVVEKIR ALGQRQKQLE RELESVKAKV AAGATADLSG QAVEVAGVKV
LAARLEGFDA KALRDAMDRL KQQLGDAVIV LAGAQDGKAA LVAGVNGSAM GKVKAGELLS
HIAGQIGGKG GGRPDLAQGG GEDGPALATA LAAVVEWVSP RL
|
|---|
| |