Gene Smal_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1475 
Symbol 
ID6475339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1658228 
End bp1658863 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID642730652 
ProductLexA repressor 
Protein accessionYP_002027863 
Protein GI194365253 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.457406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA CCGACACCCA GCAGGCGATC CTGCAGTTGA TCGCCGAGCG TATCGAGAGC 
GAAGGCGCAC CGCCGTCGCA GACTGAAATC GCGCGTGCAT TCGGCTTCAA GGGCGTGCGC
GCGGCCCAGT ACCACCTGGA AGCCCTGGAG CAGGCCGGTG CGATCCGTCG CATTCCGGGC
CAGGCCCGTG GCATCCGCCT GGTGCAGGCG CCACCACTGG AGAAGCTGGC CGAGCCGGGC
CTGCCCGACA ACGTCCTGCG CCTGCCGGTG CTCGGCCGGG TCGCAGCGGG CCTGCCGATC
GGTGCGGACA TCGGCTCGGA TGATTTCGTG GTGCTGGACC GGGTGTTCTT CTCGCCGGCG
CCGGATTACC TGCTCAAGGT GCAGGGCGAT TCGATGATCG ACGAGGGCAT CTTCGACGGT
GACCTGATCG GCGTGCATCG CACCCGCGAC GCCCATTCCG GGCAGATCGT AGTGGCCCGC
ATCGATGACG AGATCACCGT CAAGCTGCTG AAGATCGCCA AGGACCGTAT CCGCCTGCTG
CCACGCAACC CCGACTACAA GCCGATCGAG GTGCTGCCGG ACCAGGACTT CTCGATCGAA
GGCCTCTATT GCGGCCTGCT GCGGCCCAAC CGTTGA
 
Protein sequence
MDLTDTQQAI LQLIAERIES EGAPPSQTEI ARAFGFKGVR AAQYHLEALE QAGAIRRIPG 
QARGIRLVQA PPLEKLAEPG LPDNVLRLPV LGRVAAGLPI GADIGSDDFV VLDRVFFSPA
PDYLLKVQGD SMIDEGIFDG DLIGVHRTRD AHSGQIVVAR IDDEITVKLL KIAKDRIRLL
PRNPDYKPIE VLPDQDFSIE GLYCGLLRPN R