Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1475 |
Symbol | |
ID | 6475339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1658228 |
End bp | 1658863 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642730652 |
Product | LexA repressor |
Protein accession | YP_002027863 |
Protein GI | 194365253 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.457406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGA CCGACACCCA GCAGGCGATC CTGCAGTTGA TCGCCGAGCG TATCGAGAGC GAAGGCGCAC CGCCGTCGCA GACTGAAATC GCGCGTGCAT TCGGCTTCAA GGGCGTGCGC GCGGCCCAGT ACCACCTGGA AGCCCTGGAG CAGGCCGGTG CGATCCGTCG CATTCCGGGC CAGGCCCGTG GCATCCGCCT GGTGCAGGCG CCACCACTGG AGAAGCTGGC CGAGCCGGGC CTGCCCGACA ACGTCCTGCG CCTGCCGGTG CTCGGCCGGG TCGCAGCGGG CCTGCCGATC GGTGCGGACA TCGGCTCGGA TGATTTCGTG GTGCTGGACC GGGTGTTCTT CTCGCCGGCG CCGGATTACC TGCTCAAGGT GCAGGGCGAT TCGATGATCG ACGAGGGCAT CTTCGACGGT GACCTGATCG GCGTGCATCG CACCCGCGAC GCCCATTCCG GGCAGATCGT AGTGGCCCGC ATCGATGACG AGATCACCGT CAAGCTGCTG AAGATCGCCA AGGACCGTAT CCGCCTGCTG CCACGCAACC CCGACTACAA GCCGATCGAG GTGCTGCCGG ACCAGGACTT CTCGATCGAA GGCCTCTATT GCGGCCTGCT GCGGCCCAAC CGTTGA
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Protein sequence | MDLTDTQQAI LQLIAERIES EGAPPSQTEI ARAFGFKGVR AAQYHLEALE QAGAIRRIPG QARGIRLVQA PPLEKLAEPG LPDNVLRLPV LGRVAAGLPI GADIGSDDFV VLDRVFFSPA PDYLLKVQGD SMIDEGIFDG DLIGVHRTRD AHSGQIVVAR IDDEITVKLL KIAKDRIRLL PRNPDYKPIE VLPDQDFSIE GLYCGLLRPN R
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