| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1471 |
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| Symbol | hfq |
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| ID | 6475335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1654093 |
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| End bp | 1654368 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642730648 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_002027859 |
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| Protein GI | 194365249 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAAGG GGCAATCGCT GCAGGATCCT TTCTTGAACG CACTGCGGCG CGAACGCGTG
CCGGTTTCGG TGTACCTGGT GAACGGCATC AAGCTGCAGG GCACGATCGA GTCGTTCGAC
CAGTTCGTGG TCCTGCTGCG CAACACGGTC AGTCAGATGG TCTACAAGCA CGCCATTTCC
ACGGTCGTTC CAGCACGCAA CGTGAAGGTC GGTCCGGGCG GTGGTTACGT GCAGTCGGGT
GAAGGTGGTC AGGCAGGTGA TGAAGCAGAC GAGTAA
|
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| Protein sequence | MSKGQSLQDP FLNALRRERV PVSVYLVNGI KLQGTIESFD QFVVLLRNTV SQMVYKHAIS
TVVPARNVKV GPGGGYVQSG EGGQAGDEAD E
|
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