Gene Smal_1455 details

Gene Information

• Locus tag: Smal_1455
• Symbol: ispF
• ID: 6475319
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Stenotrophomonas maltophilia R551-3
• Kingdom: Bacteria
• Replicon accession: NC_011071
• Strand: +
• Start bp: 1640784
• End bp: 1641281
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 642730632
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002027843
• Protein GI: 194365233
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCACCG CACCGTTCCC GCCCGTCCGC ATCGGCCAGG GCTACGACGT CCATGCCTTC 
GGTGAAGGCG ACCACATCAT GCTCGGCGGA GTGAACGTGC CGCACAGCTG CGGCGTGCTC 
GCACACAGCG ATGGCGACGT GATCCTGCAT GCGCTGTGCG ATGCCATGCT GGGTGCGATC 
GCGCTGGGTG ACATCGGCCA GCATTTCCCG CCCAGCGACG ATCGCTGGAA GGGCGCCGAC 
AGCAGCGATT TCGTGCGCCA CTGCGACAGC CTGCTGCGCG GGCGCGGCTG GCGCGTCGGC 
AACACCGACA TCACCGTGAT CTGCGAGCGG CCGAAGGTCG GCCCGCACGC GTTGGCCATG 
CGCGAACGCA TCGGCGAGCT GCTGCAGCTG CCGCTCGACG CGGTCAGCGT CAAGGCCACC 
ACCTCGGAGA AGCTGGGCTT CACCGGCCGT GGCGAAGGCA TCGCCGCGCA GGCGGTAGTG 
CTGCTGGTGG CGGCATGA 

 

Protein sequence

MSTAPFPPVR IGQGYDVHAF GEGDHIMLGG VNVPHSCGVL AHSDGDVILH ALCDAMLGAI 
ALGDIGQHFP PSDDRWKGAD SSDFVRHCDS LLRGRGWRVG NTDITVICER PKVGPHALAM 
RERIGELLQL PLDAVSVKAT TSEKLGFTGR GEGIAAQAVV LLVAA