Gene Smal_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1409 
Symbol 
ID6475269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1600744 
End bp1601472 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID642730582 
ProductABC transporter related 
Protein accessionYP_002027797 
Protein GI194365187 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.773805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTA CACGCGCCGT CGCCCCGACC CTGCAGGCCG ATGCATTGGA AAAGGGTTTC 
ATGTCCGGGG ATGTGCAGGT GCCGGTGCTT CGCGGCCTCT CGCTGGACAT CTACCCCGGT
GAGCTGACCC TCGTGTCCGG TCCGTCTGGT TGCGGCAAGA GCACGCTGTT GTCGTTGCTG
TCCGGCCTGT CCGCGCCCGA CGGTGGCCGC GTGCACGCAC TCGGCCAGGA CGTGGGCCAC
ATGACGCGCA GCGAAGTGGA GCGCTTCCGC CTGCACCATG TCGGCTTCGT GTTCCAGGGC
TTCAACCTGT TCCCGGCGCT GACTGCACTG GAACAGGTGC AGCTGCCGCT GGGCTATCGC
GGCATGAGCA ATCGCGAAAG CGAACCGCTG GCGCGCAAGG CATTGGACGA GGTCGGCCTG
ACCCATCGCA GCCACATGCG TCCGGCGCAG TTGTCCGGTG GCGAGAAGCA GCGCGTGGCC
GTTGCCCGCG CCTTCGCCAA GTCGCCGACG CTGATCTTCG CCGACGAACC GACCAGTGCG
CTGGATGCCG AGAATGGCCA GCGCGTGATC GACATCCTGC ATCGCTACGC ACGTGCGCAT
GGCGCCACCG TGCTGTGCGT GAGCCACGAT CCGCGCCTGA TCCGGCATGC CGATCGGGTG
ATCGCCATGG AAGACGGCAT GGTCCGTGAT GACCGCCGCC AGAACGAAAC TGTAGAGTCC
GCCCCATGA
 
Protein sequence
MTSTRAVAPT LQADALEKGF MSGDVQVPVL RGLSLDIYPG ELTLVSGPSG CGKSTLLSLL 
SGLSAPDGGR VHALGQDVGH MTRSEVERFR LHHVGFVFQG FNLFPALTAL EQVQLPLGYR
GMSNRESEPL ARKALDEVGL THRSHMRPAQ LSGGEKQRVA VARAFAKSPT LIFADEPTSA
LDAENGQRVI DILHRYARAH GATVLCVSHD PRLIRHADRV IAMEDGMVRD DRRQNETVES
AP