Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1409 |
Symbol | |
ID | 6475269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1600744 |
End bp | 1601472 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642730582 |
Product | ABC transporter related |
Protein accession | YP_002027797 |
Protein GI | 194365187 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.773805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCTA CACGCGCCGT CGCCCCGACC CTGCAGGCCG ATGCATTGGA AAAGGGTTTC ATGTCCGGGG ATGTGCAGGT GCCGGTGCTT CGCGGCCTCT CGCTGGACAT CTACCCCGGT GAGCTGACCC TCGTGTCCGG TCCGTCTGGT TGCGGCAAGA GCACGCTGTT GTCGTTGCTG TCCGGCCTGT CCGCGCCCGA CGGTGGCCGC GTGCACGCAC TCGGCCAGGA CGTGGGCCAC ATGACGCGCA GCGAAGTGGA GCGCTTCCGC CTGCACCATG TCGGCTTCGT GTTCCAGGGC TTCAACCTGT TCCCGGCGCT GACTGCACTG GAACAGGTGC AGCTGCCGCT GGGCTATCGC GGCATGAGCA ATCGCGAAAG CGAACCGCTG GCGCGCAAGG CATTGGACGA GGTCGGCCTG ACCCATCGCA GCCACATGCG TCCGGCGCAG TTGTCCGGTG GCGAGAAGCA GCGCGTGGCC GTTGCCCGCG CCTTCGCCAA GTCGCCGACG CTGATCTTCG CCGACGAACC GACCAGTGCG CTGGATGCCG AGAATGGCCA GCGCGTGATC GACATCCTGC ATCGCTACGC ACGTGCGCAT GGCGCCACCG TGCTGTGCGT GAGCCACGAT CCGCGCCTGA TCCGGCATGC CGATCGGGTG ATCGCCATGG AAGACGGCAT GGTCCGTGAT GACCGCCGCC AGAACGAAAC TGTAGAGTCC GCCCCATGA
|
Protein sequence | MTSTRAVAPT LQADALEKGF MSGDVQVPVL RGLSLDIYPG ELTLVSGPSG CGKSTLLSLL SGLSAPDGGR VHALGQDVGH MTRSEVERFR LHHVGFVFQG FNLFPALTAL EQVQLPLGYR GMSNRESEPL ARKALDEVGL THRSHMRPAQ LSGGEKQRVA VARAFAKSPT LIFADEPTSA LDAENGQRVI DILHRYARAH GATVLCVSHD PRLIRHADRV IAMEDGMVRD DRRQNETVES AP
|
| |