Gene Smal_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1394 
Symbol 
ID6475252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1582961 
End bp1584304 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content67% 
IMG OID642730565 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002027782 
Protein GI194365172 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.335601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTC CGATCCGTTC CATCACGCTG GGTCTGGCCT GGCGCCTGTT CCTCGCGCAG 
GCCTTCACCG TGCTGTTCGC GGTGGTCGCG CTGATCCTGA CCTGGGGCGA CAAGGACACC
TGGGGCATGG ACATGTTCAT GGCCGAGGCG GTTGCCAAGG CGGTGCACAG CGAGGGCAGC
CATTTGGTCC TGGACGAAGC ACGCTGGCGC AGGCTGGACG CGGAGGCGGG TGGCAACCTG
TGGTTCGCGG CCGTCGATGA CAAGGGCGTT TGGCTGGAGC GCGGCACCAT CCCTGCGATC
CACGCACCGC TGCTGGCGCG TCTGCCGACG CTGGGTGCCA CCGAACTCGG CTCGCTGGTG
CCACCCTACC TGGACGTGGC GCGGGTGATG ATCCGCAACG AAGATGGTCG CCGTATCACG
GTGATGGTCG GTGGCGCGCC GAAGGGTGGT CTGCTGGACG GCGCACTGAT GGTGCTGCGC
CTGATCGGCC TGTGGTTCTT CCTGCCGTTG ATCGTGGTCA CGTTGCTGGT GATGCCGACG
GTGATCCATC GCGCGATGCG CGGGGTGCGC CGTTCCGCGC AGCAGGCCAA GGAGCTGGAT
ATCGGCCAGC CGGGTGCACG ACTGGATGCA CAGCTGGTGT CGACCGAGGT CGCACCGCTG
GTGGAAGCTT TCAACGATGC CATCGACAAG GTGCAGCAGG GCTATGCTGC GCGCGACAAG
TTCCTCGCCG ACGCCGCGCA CGAACTGCGC GTGCCGATCG CAGTGGTGCA GGCGCGCTTG
TCGCAGCTGC CACAGGGCGA GTTGAAGTCG CAGCTGCTGA CCGACGTGGC CCGCCTTGGC
AACGTCGCCG AGCATCTGCT CGACCTGCAG CGGCTTGACC GCAATGTCGG CGCACTGCAG
CGGCTGGACC TGGCGCTGCT GGTGCGCGAA GCGGCCGCGG ATCTTGCGCC GTTGGTCGTC
GGCGCTGGAT ATGGCTTTGA AGTGGATGCA CCGGAAGTGC CGGTGTGGAT CCACGGCGAC
AGCCTGGCGC TGGGGCGGGT GATCGCCAAC CTGGTGCACA ACGCCATCGT CCACGGCGGT
GGGCGGGGCA CCATCTGCGT ACGGCTGGAC GCGCGCGGCC TGCTGGAAGT CAGTGACCAG
GGTGCAGGCA TTCCGGTCGG TGACCGCGAG GCGATCTTCG AGCCGTTCCA TCGGCTGCGT
GCGGCCGGCA GTGGTAGTGG CCTGGGCCTG CATCTGGCCA AGGAAATCGT GCAGCACCAT
GGTGGGTCGG TCAGCGTGGG TGAAGCGATC GGCGGCGGCG CCAGTTTCCG GGTCAATTTC
CATCGCGGTA GCGTCCGCCG CTGA
 
Protein sequence
MARPIRSITL GLAWRLFLAQ AFTVLFAVVA LILTWGDKDT WGMDMFMAEA VAKAVHSEGS 
HLVLDEARWR RLDAEAGGNL WFAAVDDKGV WLERGTIPAI HAPLLARLPT LGATELGSLV
PPYLDVARVM IRNEDGRRIT VMVGGAPKGG LLDGALMVLR LIGLWFFLPL IVVTLLVMPT
VIHRAMRGVR RSAQQAKELD IGQPGARLDA QLVSTEVAPL VEAFNDAIDK VQQGYAARDK
FLADAAHELR VPIAVVQARL SQLPQGELKS QLLTDVARLG NVAEHLLDLQ RLDRNVGALQ
RLDLALLVRE AAADLAPLVV GAGYGFEVDA PEVPVWIHGD SLALGRVIAN LVHNAIVHGG
GRGTICVRLD ARGLLEVSDQ GAGIPVGDRE AIFEPFHRLR AAGSGSGLGL HLAKEIVQHH
GGSVSVGEAI GGGASFRVNF HRGSVRR