Gene Smal_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1392 
Symbol 
ID6475250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1581376 
End bp1582143 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID642730563 
ProductMltA-interacting MipA family protein 
Protein accessionYP_002027780 
Protein GI194365170 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.212014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCGC TGTCCCCGAA CCTGCTGCGC CCGTTGCTGT TCTCCGCCGC CATCGGCCTG 
CCGCTGGCAG CGTACGCCGC CGAGCAGAAC CCGGGCGTGC AGGCCGGTAT CAGCGCGGGG
GCGACCTCTG GTGCGTACGC CCACTATGAC GTCAAGCCGC TGGTCGTACC GTCCATTGCC
TGGCAGGGCC AGCGCTTCTT CGCCAGCCCC GGCTCGCTGG GCATGTACCT GTACAAGGGC
CAGGGCCTGC GCCTGTCGGC AGCGGTCACC CCGTACACGC TGCGCTTCAA GACCGACGAC
GTGAACGATC CGCAGCTGCG CCGCCTGCAC AGCCGGCAGA TGTCGGCCAT GGCCGGGCTC
AACGGCGAGT ACAGCGCGGA CTGGGGCATC GTCGAAGCCA GCGTGATGCG CGAGGTCACC
GGCCATGGCG GCGGCATTGA ATCGCGCCTG CATTACAGCT ACCCGATCCA GGCCGGACGC
TTCACCTGGG TGCCCCGGGT GGGTGTGGTG CATTCCAGTG CACGCCTGCT CGATTACTAC
TACGGCATCA GCGACGAAGA AGCGGTGCGC TCGGGGCTTG CCGCCTACAA CCCGGGTAGT
GCGACGTCGC CCAGTCTGCA GATCGCGGTC AGCACGCCCC TGGGCACGAA GTGGCGTGCG
ACCGGCGTGG TCGCCAACCA ATGGTTCGGC GATGCAGTGA AGGACAGCCC GATGGCGCGG
CGCGGAACAC AGACGTCGGC CTTCGTTTCC CTGATGCGCT CGTTCTGA
 
Protein sequence
MPSLSPNLLR PLLFSAAIGL PLAAYAAEQN PGVQAGISAG ATSGAYAHYD VKPLVVPSIA 
WQGQRFFASP GSLGMYLYKG QGLRLSAAVT PYTLRFKTDD VNDPQLRRLH SRQMSAMAGL
NGEYSADWGI VEASVMREVT GHGGGIESRL HYSYPIQAGR FTWVPRVGVV HSSARLLDYY
YGISDEEAVR SGLAAYNPGS ATSPSLQIAV STPLGTKWRA TGVVANQWFG DAVKDSPMAR
RGTQTSAFVS LMRSF