| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1382 |
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| Symbol | |
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| ID | 6475237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1571531 |
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| End bp | 1575295 |
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| Gene Length | 3765 bp |
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| Protein Length | 1254 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642730550 |
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| Product | PilY1 protein |
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| Protein accession | YP_002027770 |
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| Protein GI | 194365160 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.660708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC GCAATCGCAG AATCCTGGCA GGCATCGGCC TTGCTGTTCT GGCCGCTGGT
GGCTATCTGG CGCATACCCT GTTTGCCGCC CAGGCTCAGG GTGTGCTGGC ACAGGAGCCG
ATGAACGTGC AGACGCGTGC GACGCCGGCC TTCATCATGG CGGTGGATGA TTCAGGTTCG
ATGAACTTCG AACGCATGTT CCCAGGTGGT GACGGGCGCA TGCGCTGGAA CAGCAATACG
AGTAGCTTCT TCAACAACGA TGGAAGCTTC TTCAGCGTTG GCTCGGCATG CGCCAACAAC
TCGGTAGACT GCTACCTCTA CCTCTACCCA CATGCGGATT TCAACAAGGA GTACAGCCCA
GGGCGCGCCA TTCCGCCGCT GGATATCTAC GGCTTTGCTC GTTCGCATAT CTATAACGCC
AGCTATTTCA ATCCGGGTGT GACCTATAGG CCGTGGACGA ACGCCGATGG CACGCTATGG
GCCGACGCGA CGATCACCCA GACCCGCGCC GATCCGCGTT CCGGGCAGCG CGGCTACAAC
GCCGTCTACA ACATGACGGT CAATCGCGCT GATACTTCCG AGAAGTTCCA GTTCGTCAAC
GGCATGCGGA TTCCCGACCT TAGTGGTACT GGCAATGAGT ACTATGTCGA CAGCTGGTGG
GACGGTGGAT GGAAGACTGC TGGGATCAGC AACACCGGCA ACACCACTTA TGCGATCAAC
TATTTCCCGG CCACGTTCTA CCTGCCTGCT GCCGCGGATG CACCCGCCGG ATACAAGACC
GATGACACCA ATCGTCCGGT GATCAGCGGT GCCTGTGGCC CGGGCTGCAA CATGCGCCGC
TACCAGATCA AGTCGGGCAA TTACACAAGC CCGGCGGCCT ACAACGCGGC AATCCAGAAT
TTCGCCAACT GGTTCCAGTA TCACCGCAAC CGTGTGCTGG CCATTGTCGG CTCCTCGACC
GCCGCGCTGG TGAGCGTGGA TACGATGCGC GTGGGTTACT TCACCATCAA CAAGCTCAGC
AACGCGACCA TGTACGACAT GGTTACCAAC CGAGCTGACC TGTACAAGCA GATCTACGCC
CTGACCGCCA ATGGCGGCAC GCCCAACCGG CGCGCAGTGG AGTACCTGGT CGACCAGTTC
CGGCGGACCG ATACCGACGC GCCTGTGCAG CTGGCCTGCC AGCGAAATGG CGGCATGCTG
TTCACCGACG GCTATACCAA CTCCGGCAAT GCGCCGAATG GGTCCTTCGG TGACGCTGAC
TCGGTGAACT CGACCCATTT GCCATCCATT CCTTTCGCCG ATGGCTACAG CAACACCATT
GCCGACATCG CGGCGGCCGC CTATGCCGGT GCCCGTACGC CACTTCGCAC CGGGACCAGC
TTCCCGGCCG GTCAGGTGCC GGTGAGTGAC AAGTGCAACA CATTGGACAA GGGCAGTCCG
GACTGGAAGC GTCTGGACTG CCAGACCGAT CTGCACATGA ACTTCTATGG CGTGACCCTC
GGTGCGCAGG GACGCATCTA CGGTGTCAAC CAGTCCGCAA CCGAGGACCC GTACAAGAAC
GCGCCAAACT GGGCCGGCAA CGGCAATCCG CTGGATGTCG ATGACGGTAC CGTCATCGAT
GAGCTGTGGC ATGCCGCTGT CAACACCCGC GGTGAGTTCA TCAACGCACA GACGCCGGCT
GATGTGACCG AGGCCATGCG ACGTGTGCTG TCCTCGATCA CCGGTGGTGC ATCGCCGTCG
GGCACGATCG GTATCAGTGG CGCGCGCATC GGCGCAGGCT CGCTGGCGGT CACGCCCCGC
TATGACATCA CCAACAGTGG CACTGACTGG TCGAGCAAGC TGAGCGCTGC CAGCGTCAAG
ATTAACGCGG ATCAGGTGGC GGAGTTCACC GAGGTATGGG AAGCCTCCAG TCGTCTTTCC
CCGTCTGGAC GGCGGATTGT GGCAAACAAG GCCGGTGCGC CGGTGGACTT CAACAGTGCC
CGGATCAGCC TGCAGGATCT GTGCAGCAAG CCCAGCGGCA AGTACGCATC GATGCTGGTC
TGTTCGACGG ACAAGCTGAC GACGATCAAG GCCGATCTTG CCAGTGCCAT CAACTATCTC
AGTGCGGACA GTTCAACCGA GGTCCGCAAC GGCGGCAAGT ACCGTGACCG GACAACACCG
CTGGGCGACA TCGTCAATTC GGCGCCGGTG GTGAGTTCGC CGCTGGACGA CTTTGGTTAC
CGCCAGCTGG GCGGGACCTT GGCCAAGAGC TACACCGACT ACCTTGCTGC CAAAGCCAAA
TCGCGCCGGT ACATGGTCTA TGTCGGCGCC AACGACGGCA TGCTGCACGC CTTCGACGGC
GGCATGGGGG CCGATGCCAA GCAGGACGGT GCCGGTGGCA GCGAGAGTTT TGCCTACATT
CCGGCCACGG CGCTTGGTCA CATGGCCAAC CTGCTGTTTC CCTACAAGTC CGATACGTCT
GACCAGACCT TCCGTCATCG TTATTACGTC GATGGCCCGG TTGCCGTATC CGACACCTTC
AATGGCACTT CCTGGCAGAC CAGTCTGGTT GGCACCACCG GTGCGGGTGG TCGCTCGGTA
TTCGCGCTGG ATGTGAGTGC GCCGGGCAGC TTCGGCACCG GCAACGTGCT TTGGGAAATC
AGTGACATCA ATTCTTCGCT GAAGGACGAG GTGCGCAACA GCATCGGATT CGTGCTTGGC
AAGCCAGTGA TCGTGCCTGT GAAGAGCGGA ACGGGTGTGG CGTGGAAGGC GATCTTCGGC
AACGGCTATG GCAGCGCCAA CGGAAAGGCT GTGTTGTTCG TGGTCGACAT GGCCAGTGGC
GACATCCGGA TGATCGAGGC TGTGGAAGGT GCCACCGGCT CCACCGTGTC CGGTGATAAC
GGCCTGGGCA ACGTGGTCGT GGTCGATCGC TGGACGGGTG CGGGTCAGGA TGTACGTGGT
CGTGACGGAT TGGCGGACAC GGTCTATGCG GCGGACCAGC GCGGTGCCTT GTGGAAGTTC
GACCTGACCA GCAGTGCCAA CACCACGCTG ACCGTGCCGG TGTTCACCAG CCAGCTCAGC
CAGGATTCCT CTGGCAAGAG CTATCGGCAG CCGATCACAG GTGGTATGAC TGCTGCAACC
GGTCCGTCGG GCGGGGTGAT GCTCTACTTC GGTACCGGCA GCTTCTCGTT CACCAGTGAC
AAGGATGACA AGGCGCAGCA GGCGCTGTAT GCGGTCAACG ACCTGTCCGG CAAGAGTGTG
ACCTCGACGC TGACCGCTGC CAATCTGGTT CCCTACACAG CAGCGGCGCC GGCCGCGAAC
AGCGATGAGC GCAAGATCAG TGCAGGAACG GCCCCGGCCA GTGCGAGAGG CTGGATGATC
CAGTTGCCGG CCGGCAACGG TGAGCGTGTT GTCGGCAATC CACTGCTGGT CAGCGGCATC
GTCTTCATGC CGACCTACGT GCCCAACATG CAGTCGGTCG GCTGTTCGAC CAGTGGCTCG
AACTGGCTGT TCGGACTGTC CTCGATCAGC GGTGCGCCAA TGCTGGAGAA CGTACGCTAT
GGATCACCGA CCGGTAGCCG GCCTGCTTCC GGTACGGCAG CCATTGCATT GAAGACGGGA
GGCACTGCGC CAGTGCGTGA TGTCTCCTTG TCGGTGCTGC CGCGTCCGAC GGACAAGTCC
CCACCTGGCG GCAGTTCGTG CTGGATGGCC GCCGGTGCCG CCGGCAGCCA GTCGCTGTAT
CTGCCTTATC CCTGCGGTCG CCAATCCTGG CGCCAGCTCC AATGA
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| Protein sequence | MKTRNRRILA GIGLAVLAAG GYLAHTLFAA QAQGVLAQEP MNVQTRATPA FIMAVDDSGS
MNFERMFPGG DGRMRWNSNT SSFFNNDGSF FSVGSACANN SVDCYLYLYP HADFNKEYSP
GRAIPPLDIY GFARSHIYNA SYFNPGVTYR PWTNADGTLW ADATITQTRA DPRSGQRGYN
AVYNMTVNRA DTSEKFQFVN GMRIPDLSGT GNEYYVDSWW DGGWKTAGIS NTGNTTYAIN
YFPATFYLPA AADAPAGYKT DDTNRPVISG ACGPGCNMRR YQIKSGNYTS PAAYNAAIQN
FANWFQYHRN RVLAIVGSST AALVSVDTMR VGYFTINKLS NATMYDMVTN RADLYKQIYA
LTANGGTPNR RAVEYLVDQF RRTDTDAPVQ LACQRNGGML FTDGYTNSGN APNGSFGDAD
SVNSTHLPSI PFADGYSNTI ADIAAAAYAG ARTPLRTGTS FPAGQVPVSD KCNTLDKGSP
DWKRLDCQTD LHMNFYGVTL GAQGRIYGVN QSATEDPYKN APNWAGNGNP LDVDDGTVID
ELWHAAVNTR GEFINAQTPA DVTEAMRRVL SSITGGASPS GTIGISGARI GAGSLAVTPR
YDITNSGTDW SSKLSAASVK INADQVAEFT EVWEASSRLS PSGRRIVANK AGAPVDFNSA
RISLQDLCSK PSGKYASMLV CSTDKLTTIK ADLASAINYL SADSSTEVRN GGKYRDRTTP
LGDIVNSAPV VSSPLDDFGY RQLGGTLAKS YTDYLAAKAK SRRYMVYVGA NDGMLHAFDG
GMGADAKQDG AGGSESFAYI PATALGHMAN LLFPYKSDTS DQTFRHRYYV DGPVAVSDTF
NGTSWQTSLV GTTGAGGRSV FALDVSAPGS FGTGNVLWEI SDINSSLKDE VRNSIGFVLG
KPVIVPVKSG TGVAWKAIFG NGYGSANGKA VLFVVDMASG DIRMIEAVEG ATGSTVSGDN
GLGNVVVVDR WTGAGQDVRG RDGLADTVYA ADQRGALWKF DLTSSANTTL TVPVFTSQLS
QDSSGKSYRQ PITGGMTAAT GPSGGVMLYF GTGSFSFTSD KDDKAQQALY AVNDLSGKSV
TSTLTAANLV PYTAAAPAAN SDERKISAGT APASARGWMI QLPAGNGERV VGNPLLVSGI
VFMPTYVPNM QSVGCSTSGS NWLFGLSSIS GAPMLENVRY GSPTGSRPAS GTAAIALKTG
GTAPVRDVSL SVLPRPTDKS PPGGSSCWMA AGAAGSQSLY LPYPCGRQSW RQLQ
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