| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1356 |
|---|
| Symbol | |
|---|
| ID | 6475211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 1547189 |
|---|
| End bp | 1548301 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642730524 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_002027744 |
|---|
| Protein GI | 194365134 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000392503 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC GCCGGCTGTG GGCGATCATG CTCAAGGAAC TGCGGCAGCT GCGCCGCGAC
CGCATCACGC TGGCGATGAT CGTCGGCATT CCGGTAATGC AGCTGCTGCT GTTCGGCTAC
GCGATCAATC TCAACCTGCG CCATCTCGAC GCCGGTGTCG CCGACCAGGC CAACAGTGCG
GCGTCGCGTG CGCTGGTGCA GGACATGGTG GCCACTGGTG TGATCACGCC GCGCAGCGAC
ACCTACACGC CTGATGAGCT GATGCAGGCG CTGCGCCGAG GCGAAATCAG TGTCGGCATC
GTGGTGCCGG CCGACTTCGA GCGTCGTCGC TTCGATGGAC GCGAGGCAGT GCAGGTACTG
GTCGATGGCA GTGACACGGT GGTGCAGAGC GCGGCGATCC AGCTGGCGCA GGTGCCGCTG
GAGGCACGAC CGACCAGCAA CACGCGTCCC CTGCGCGAAG GCAGCATCGC TGGTGGTCCG
ATCAGCGTGA CCAGCTTCTA CAACCCGCAG CGGCGTTCGG CAGTGAACAT CGTGCCGGGC
CTGATCGGGG TGATCCTGAC CATGACCCTG GTGATGTTCA CTGCCGTGGC GGTGGTGCGC
GAACGCGAGC GCGGCAACAT GGAACTGCTG ATCGCCACGC CGGTGTCACG CAGCGAACTG
ATGGTCGGCA AGGTGCTGCC CTATGCGGCC ATCGGCCTGC TGCAGACCAC GCTGGTATTG
GTGCTGGGCA CCTGGCTGTT CCAGGTGCCG ATCCGCGGCA GCCTGCTGGA CATCTATCTG
GCCGCGGTGC TGCTGGTGCT GGCCAACCTG GCGCTGGGCC TGTTGATTTC CACGCGCGCA
CGCTCGCAGT TCCAGGCCAT GCAGATGACC CTGTTCCTGT TCCTGCCGTC GATCCTGCTG
TCGGGCTTCA TGTTCCCGTT CGCCGGCATG CCGCGGCCGG TGCAGTGGCT GGCCGAGGTG
CTGCCGCTGA CCCATTTCCT GCGCCTGGTG CGCGGCATCA TGCTGCGCGG CGCCTCGCTG
TGGGAGCTGT GGCACGACGC GCTGGCACTG CTGGCCTTCA TCGTGGTGAT GATGACGCTG
GCGATCCTGC GCTTCCGCAA GCGCCTGGAT TAG
|
|---|
| Protein sequence | MNLRRLWAIM LKELRQLRRD RITLAMIVGI PVMQLLLFGY AINLNLRHLD AGVADQANSA
ASRALVQDMV ATGVITPRSD TYTPDELMQA LRRGEISVGI VVPADFERRR FDGREAVQVL
VDGSDTVVQS AAIQLAQVPL EARPTSNTRP LREGSIAGGP ISVTSFYNPQ RRSAVNIVPG
LIGVILTMTL VMFTAVAVVR ERERGNMELL IATPVSRSEL MVGKVLPYAA IGLLQTTLVL
VLGTWLFQVP IRGSLLDIYL AAVLLVLANL ALGLLISTRA RSQFQAMQMT LFLFLPSILL
SGFMFPFAGM PRPVQWLAEV LPLTHFLRLV RGIMLRGASL WELWHDALAL LAFIVVMMTL
AILRFRKRLD
|
|---|
| |