Gene Smal_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1345 
Symbol 
ID6475200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1536421 
End bp1537263 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID642730513 
ProductOrnithine carbamoyltransferase 
Protein accessionYP_002027733 
Protein GI194365123 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.593277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGC GTTCCGCCAA GGGCCTGGGG CTGGGCGTGC TGCTGCTCGG CTTCGCCTTC 
CTGTACCTGC CGATCCTGTT GTTGATGTTC TATTCATTCA ACAGCTCGCG GCTGGCGATG
GTCTGGGCCG GGTTCTCCAC CCGCGCCTAC AGCGACCTGT TCGCCGACCG CGCGCTGATG
GACGCAATGT GGACCAGTCT GGTGGTGGCG TTCTGGACCG CCTGTACCGC CACCGTGCTG
GGCACGCTGG CGGCGATGGT GATGACCCGC TTCAAGCGCT TCCGTGGCAA GCCGCTGTTC
GGCGCGCTGG TGACCGCGCC GCTGGTGATG CCGGATGTGA TCCTCGGCTT CTCGCTGATG
GCGCTGCTGG CCTCGATGGG CGCGATTCCC GGCTTCCCGG CACGTGGCTT GACCACCATC
TGGATCGCCC ACGTCACCTT CACCCTGTGC TTCGTCACCG TGGTGGTGTC CTCGCGCCTG
CAGGAAATGG ACCTGTCGCT GGAAGAAGCC GCGATGGACC TGGGCGCGAG CCGGCTGACC
GTGTTCGGGC GCATCACCCT GCCGATCATC GCACCGGCGC TGGTGGCCGG TTGGCTGCTG
GCGTTCACCC TGTCGCTGGA TGACGTGGTG GTGGCCAGCT TCGTCGCCAC ACCGGGCTCG
ACTACGCTGC CGATGAAGGT GTTCGCCTCG GTGCGCATGG GCATCAGCCC GAAGATCAAC
GCGTTGGCCA CCCTGCTGGT GTCGGCGGTG TCGATCGCCG CGGTGATCGG CTGGTACATC
AACGCGCGTG CCGAGAAACG GCGCCAGCGC GACCTGCAGC TGGCACGGCA GGACAACGGC
TGA
 
Protein sequence
MSPRSAKGLG LGVLLLGFAF LYLPILLLMF YSFNSSRLAM VWAGFSTRAY SDLFADRALM 
DAMWTSLVVA FWTACTATVL GTLAAMVMTR FKRFRGKPLF GALVTAPLVM PDVILGFSLM
ALLASMGAIP GFPARGLTTI WIAHVTFTLC FVTVVVSSRL QEMDLSLEEA AMDLGASRLT
VFGRITLPII APALVAGWLL AFTLSLDDVV VASFVATPGS TTLPMKVFAS VRMGISPKIN
ALATLLVSAV SIAAVIGWYI NARAEKRRQR DLQLARQDNG